Pieris rapae (cabbage white): 111004202
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Entry
111004202 CDS
T05162
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prap04121
]
111004202
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111004202
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
U-box type E3
111004202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-CCHC
U-box
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
111004202
NCBI-ProteinID:
XP_022130799
LinkDB
All DBs
Position
13:complement(7090300..7112019)
Genome browser
AA seq
1593 aa
AA seq
DB search
MSVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLQITNAQTKEVYVDD
GTLIPKNTSLLVARVPLAQQPKKQWDNNNSQGAPVKDVSVNKGVADLSRMEGSEQDKINA
MITQSTFDYDPSNYQKIRGQNQRGAVPSNYICFKCQNRGHWIKDCPVANSSDPIEIRRSS
GIPRSFMVPVDGPKAPGAMMTPSGTFAVPAVDREAYLASESAVGPETLPNTPAAPEPTIP
DELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREKEIAPTTLIPNRF
LRNSVSSFRNQTGYSRRAPHRPSAAQPAQQKEQAPSVSVSPKNSANDAVEERGGRREESD
GSVDDNITVTVPPALTQGPAPPRPRYEHRSRYGPSKNLKIEIPPNRSKEEQRSSTPTIDE
RRDPNIPPQGVYNRGPLPYIPPQPIYGAPPPYGRPIGRPYPERFPHHDPYQPPPPGIKDS
PNGRSEDPLEAFNRMIREKEMRAKRREEERRRVKSGSRSLSRSPRLQRLSRSPRPLRGSR
SPRLPRASRSPRPPRGSPSPRPLRGSRSPRPLRDSRSPRPPRGSRSPRARPRSRGSSRLR
YSRSRSLSRGRLRRSPWSPRRRRSRDRSVSLSRSPSPRRRIRSPLRYRSALRSPVGRSPL
HSVVRTPLRSPLRSPPRSPPRGARSPPRQMSPHRFTGVYDELLSPPRRSEPSFGGRYGPR
NNVGPTFPPLGAKPVPLMGLNLQPQPEVLLPGYRGRFDPSFDDIPPGVDPPVPGFEPPPF
EKAPFGPPGSERDRLPPSNFREPYRPPAYVDGTGSYRDAPVAPISNDAPPLHLDHPRYRD
NFRGGAPYRDGGSLPYRDGQAYREQGVAHRDANYRGGSSQFRETSFRSVPYRDGNYRDNI
PPNFRESGIPFRPPSADPREQIPPFHDPNYREGFRDDTSRDGRQAMRSNNSSRRTGSRRE
KDKSRERYPDGREIPERTERSRANEKSRESRDDRVRDYDRTRDFDKDRHERGSQEKKGRS
RDIREKHRSESRGRSRERESKRDRKEDRGRDKLSPEKSKDHKDKDKKVKDRKKKKREKEK
EREIEKKKKRDKKEKKDKENKKEDNGEQKETQLTEHNKVEEMKGDAEKKESKLGQHSSEE
NENVQKLAENIKVDLYGDETAAVVDKEITESYVKSETGDCNEEVKECDAANKEEPFDGIE
LQPAADELAVDMEIPSSNNKEVLAPLPELSKWEVDDDNQEKSKEPGEITSPDLKSDSKKV
TSEVIKRAEKAIFAKAINSLRPIEIKKISSDRVKLYGDEQPKPTLNDIQITVPVTELERK
TLESSDRQSRNSKTPPPRISVKDRLGGKVENVHKGREPRVVHSTVERVKSRSKTPSIRRV
TLQKERSRKSETRNIVPKDRNTDRRVKTDNLKAENNHDKKKEKTHGDRKINDEKLGRSKI
SDNSEFNLTNDKERKKSTLDEAHFEPDYDENVESETETKEESSKKRERSASPGPTPTKKP
KIENETIKLDLTNVKKRSDTDTGSSSSDDSSSSSSSDGRKRKKKKKRTKKKKKRAASDSE
SESDSSSEDHKKKKKKRKHKKKSSKKKKKSKHK
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcattataaatttaaaagtgcgttggattacgatacagtaacctttgatggc
ctacatatatcggtaggggacttaaaagctgctatatcgcagcaaaaacgtatcggaaaa
acttctgattttgaccttcaaataacgaatgcacagaccaaagaagtgtatgtggatgac
ggtacattaattcccaaaaatacatctttactagtggccagagttcctttagctcaacag
ccaaagaaacagtgggataataataacagtcaaggagcacctgtcaaagatgtctctgtt
aataaaggggtggctgatctgtctcgcatggagggcagtgagcaggacaagattaatgct
atgattacccaatcaacttttgattacgacccaagcaactaccaaaagatacgaggtcaa
aatcaaagaggtgcagttccaagtaactatatatgtttcaaatgtcagaatagaggccat
tggattaaagattgtcctgtagctaattctagtgacccaatagaaataagacgaagttca
gggatacctcgcagttttatggtccctgttgatggtccaaaagctcctggagccatgatg
actccaagtggaacatttgctgttcctgctgtagaccgtgaggcctacttagcatcggaa
agtgcagtagggcctgaaacattgcccaatactccagcggctcctgaaccaactattcct
gatgagttgatatgtagcttgtgcagggaccttcttactgatgccgtaatgataccgtgc
tgcggaaactcattttgtgatgaatgtatacgaggagctttattggagtctgaagaccat
gaatgtccagattgtcgtgaaaaggagatagcacctactactttaattcccaataggttt
ttgaggaactctgtatcgtcgttccgtaatcagacaggatatagtcggcgagcgccgcat
cgcccgtctgcggctcagccagcgcaacagaaagaacaagctccatcagtttcagtttca
ccaaagaattcagcaaatgacgcggtagaggaaaggggcgggagaagggaggaatctgac
ggttctgtggacgacaacattacggtgacagtgccaccggcgctcacgcagggccccgcc
cctccacgaccacgatacgaacatcgatcacgatacggaccttccaaaaacctgaaaatt
gaaatacctccaaataggtcaaaggaggagcaaaggtctagcacaccaacgattgacgaa
agaagggatccgaatataccgccacagggagtgtacaatcgtggacctctaccgtatata
ccaccacagcctatttacggagcgccacctccttacggcagaccaattggaaggccatat
ccagaacgttttccgcatcacgatccatatcaacctccaccgccaggaatcaaggattct
ccaaatgggcgcagtgaggacccgctggaggcgttcaatagaatgatacgcgagaaggag
atgcgggcgaaaagaagagaagaggagcggcgtcgagtgaaatcgggttcgcggagcctc
tcgcggtcgcctcgcctccagcggctgtcgcgttccccccgccccttacggggatctcgg
tccccgcgtctgccgcgcgcctctcgatctccccgacccccgcgtggatccccttcgccg
cgccccctacggggatcccgctccccccggccccttcgggactcccgatcgccgcgccct
ccgcggggatcccggtcccctcgcgcccgccctcgtagccgtggctccagtcgcctaaga
tattctagatcgcggtcgttatcgcgtggacgcttgcgccgttctccgtggtcgccgcgt
agaagacgttcgcgggatagatctgtttcgctgtcgcgatctccatctccccgccgtcgt
atccgctctccactgcgctatcgctcggcgctgcgctctcctgttgggcgatcaccactc
cactcggtggtgcgaactccgctgcgttctccgctccgctcgccgccacgctccccgcct
cgaggtgctcgttcgccgccaaggcagatgtcgccacatagattcacgggtgtttacgac
gaactgttgtcgccgccgcgtcgtagtgagccatccttcggaggcagatatggtcctagg
aacaatgttggccccacgttcccgccacttggggctaaacctgttccgctcatgggtctt
aatctccaacctcagcccgaagtccttctcccaggttaccgaggtcgttttgatccatcg
ttcgacgacattccaccaggggtagatccaccggtaccgggattcgagccaccacctttc
gaaaaagcaccatttggtccacctggttcagaacgcgataggctaccgccatcaaacttc
cgcgaaccttatcgtcctccggcgtacgttgatggtactggaagttacagagatgctcct
gtagctccaatatcaaacgatgctccaccactgcatctggatcacccacgttacagggat
aacttcagagggggtgccccttatcgtgatggtggttctttaccttacagggatggacag
gcttacagggaacaaggtgtggcccatcgcgatgccaactatagaggtggatcatcacaa
tttcgtgaaacttctttcagaagtgtaccgtatcgggatggaaattatagagataatatt
ccacccaatttccgtgaaagtggtataccttttagaccacctagtgctgatccgagggaa
caaattcccccattccatgatcctaattatcgcgaaggatttagagatgataccagtcga
gatggcagacaagcaatgcgttccaataattcgtctcgcaggactggctctaggcgtgaa
aaggataaatctagagaaagatatcccgatggtcgtgaaataccggagagaacagaaaga
tcgcgggccaacgaaaaaagtcgtgaatcccgtgatgatcgtgtgcgtgactatgatcga
acaagagactttgataaagatcgtcatgagcgtggctcacaggaaaagaaaggtcgctct
cgagatatacgtgaaaaacatcgcagcgagtctaggggccggtctcgtgaacgtgaaagc
aaaagagatagaaaagaagacagaggtcgagacaaattatctcctgaaaaaagtaaagac
cataaagacaaagataaaaaagtgaaagaccgaaaaaagaaaaagcgtgagaaagaaaaa
gaaagagagatagaaaagaagaaaaaacgtgacaagaaagaaaagaaagataaagaaaat
aaaaaagaggataatggagaacaaaaagaaacacaacttactgaacacaataaagtggaa
gaaatgaaaggagacgcagagaaaaaagaaagtaaattaggacaacattcgtctgaagaa
aacgaaaatgttcaaaagcttgcagaaaatattaaagttgacttgtatggagacgaaaca
gctgcagttgtagataaagaaattacagagagttatgtaaaatcagaaacaggtgactgt
aatgaggaagtaaaagaatgcgatgctgctaataaagaagaaccttttgatggaattgaa
ctacaaccggctgctgatgaattggcagttgatatggaaattccttccagtaataataaa
gaggtgttggctccattgccagagctatcaaagtgggaagtggatgatgacaaccaagaa
aaatcaaaggaacctggtgaaataacttctcccgatctaaaatctgattctaaaaaagta
acatctgaagtaattaaacgggcggaaaaagcaatattcgcaaaggctataaattcgttg
cgcccaatagaaataaagaagattagtagtgaccgcgttaagttatatggagatgaacaa
ccgaaacctacgttaaatgatattcaaataactgtaccagtaactgaattagaaagaaaa
acattagaatctagcgacagacaaagtaggaattctaaaacaccaccccctcgaatatca
gtgaaagacagattaggtggaaaagttgaaaatgttcataaaggaagagaacctcgtgtg
gttcatagcactgttgaacgtgttaaatcaagatctaaaactccatctattcgcagggtg
acgttgcaaaaagagcgaagtagaaaatcagaaacccgaaacattgtgcccaaagaccga
aatacggacaggcgagtcaaaacggataatctaaaagcagaaaataatcacgataaaaag
aaagaaaaaacacacggagataggaaaattaatgacgaaaaacttggacgtagcaaaata
agtgataactctgaatttaatttgaccaacgataaagaacgtaaaaagtcaacgctagac
gaagcacactttgagccggattacgatgaaaatgtggaatctgaaaccgagaccaaagaa
gagtctagcaaaaaaagagaacgttctgcatccccaggcccaacaccgacaaagaaaccc
aagattgagaatgaaacaattaaactagatctaactaacgttaaaaagagatcagataca
gataccgggtcttctagctctgatgattcatcttcatcttcttcgtcagatggtcgtaaa
cgaaagaagaaaaagaagcgaactaagaagaagaagaaacgtgcggcaagcgatagtgaa
agcgagtctgactctagttctgaggaccataagaaaaaaaagaaaaaacgtaagcataag
aaaaagtcaagcaagaaaaagaaaaaatcaaagcataagtaa
DBGET
integrated database retrieval system
