Pieris rapae (cabbage white): 111004359
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Entry
111004359 CDS
T05162
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
111004359
03016 Transfer RNA biogenesis [BR:
prap03016
]
111004359
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111004359
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111004359
Transfer RNA biogenesis [BR:
prap03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
111004359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
PGK
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111004359
NCBI-ProteinID:
XP_022131053
LinkDB
All DBs
Position
14:3345498..3352423
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AA seq
729 aa
AA seq
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MTAFEEFGVLPEIAKAIDEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
IQIVWETLKDIQEGKTSKIITQTSTEWTMSFFDRTEALAVTPDGLRCQSRDQSGWHGCRA
TKGVHTKGLYYYEAIVTDEGLCRVGWSTQAAKLDLGTDRLGFGFGGTGKKSNAKQFDDYG
SAFGKNDVIGCMLNLNNGEIKYTKNGEDLGVAFKLDQSRRADCYFPAVVLKNAEMTFNFG
STPFKHPLPKDYTPIGQAPKEFVKVNVVSAGAATGSSKPVNNAPQAIIIEPSRELAEQTC
SQITLFKKYLDNPKIRELLVVGGINVKDQINELNSGVDIVVCTPGRLEDLIQGGYLALTH
CRFFVLDEADGLLKAGCGELIERLHRQIPKITSDGRRLQMVVCSATLHAFEVKKMAEKLM
HFPTWVDLKGEDAVPETVHHVVVNVNPQKDLFWQTARKQIQTDGVHSKDNIRSGNTTPET
LSEAVKVLKGEYCVRAIREHKMDRAILFCRTKLDCDNLERFLKSFGNEFSCVCLHGDRKP
AERKANLEKFKQSQVKFLICTDVAARGIDISGLPFMINVTLPDEKSNYVHRIGRVGRAER
MGLAISLVSTVPEKVWYHGEWCSSRGRNCFNTNLIDDRPKGCCMWYNEPQYLADIEDHLN
ITIQQVEPDMKVPSNEFDGKVVYGQKRTQAGSGYEDHVSQMEPVVRSLKELESQAQIYYL
KSHHNVIVA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagaattcggagtccttcctgaaatagcgaaggcaatagatgaaatg
gaatggacgctacctacagatgtccaagccgaagctattcctcttattcttggtggagga
gatgtgttgatggctgcagagactggcagtggaaaaactggcgccttttgcttacctata
atacaaattgtatgggaaactcttaaagacatacaagaaggaaaaacaagtaaaattatt
acgcaaacatcgacagaatggaccatgtcgttcttcgaccgaacagaagcattagctgtc
acacctgatggtttacggtgccagtctcgtgatcaatcaggttggcatggctgtagagct
actaaaggtgtccacacaaagggtttatactactacgaagccattgttactgatgaagga
ttatgcagagttggatggtctacacaagcggccaaactagatttaggtactgatagacta
ggctttggatttggtggtacagggaaaaagtcaaatgctaaacagtttgatgactatggc
agtgcttttgggaaaaatgatgtaataggttgtatgttaaatttaaacaatggtgaaatt
aaatacacaaagaatggtgaagatctaggtgttgcttttaaactggatcagtctagaaga
gcagactgctattttcctgctgtagttttaaaaaatgctgaaatgacttttaattttggt
tcaacaccatttaagcatccccttcctaaagactatactcctattggacaagcacctaag
gaatttgtcaaagtgaatgttgtctcagctggggctgcaacaggctcaagtaaaccagtt
aataatgcaccacaagctattattattgagccttcaagagaattagcagaacaaacctgt
tcccaaataaccttatttaagaagtatttagacaatccaaaaattagagaattgctagtt
gtgggaggaataaatgttaaagatcaaataaatgaattaaattctggagttgatattgta
gtctgtactccaggtcggttagaagatcttatacaaggaggttatttggccctaacacac
tgccgctttttcgtattggatgaggctgatggtctcctgaaagcagggtgtggcgagctt
attgaacgattacataggcaaataccgaaaattacttcagatggacgacgattacaaatg
gttgtttgttcggcgactctacatgcctttgaagtcaagaaaatggcggaaaaattaatg
catttcccaacctgggtggacttgaaaggcgaagatgcagtgcctgaaacagttcatcat
gttgtggtcaatgttaatccacagaaagatctcttttggcagactgcaaggaagcaaatc
caaacggatggtgtccattccaaggataatataagaagcggtaacactacacctgaaaca
ttgtctgaagctgtcaaagtactgaaaggagaatactgtgttcgtgcgattagggaacat
aaaatggaccgagctatactattttgtcgtacgaaactcgattgtgataatttggaacgg
tttctaaaatctttcggaaacgagttttcgtgtgtctgtttgcatggtgatcgtaaacct
gctgaacgaaaagccaatttggaaaaatttaaacagtcccaagtgaagtttcttatctgt
accgatgttgccgctagaggcattgatatatcaggattgccgttcatgatcaacgtgact
ctaccagacgagaaatcgaactatgtccatcgcattggccgagtgggtcgagcggagaga
atgggattggccattagtcttgtctctaccgtgcctgaaaaggtatggtatcacggggag
tggtgttcttctcgcggtcgtaactgtttcaacacaaatctcattgacgacaggcccaag
ggatgctgcatgtggtataatgaacctcagtatttggcggatatagaagatcacttaaat
ataacgatccaacaagtagagcccgacatgaaagtgcctagtaatgagtttgatggcaaa
gttgtctatggacagaaacgtactcaagcgggctctggttatgaggaccacgtcagccaa
atggaacctgtagtaaggagcttgaaggaactagaatcacaagcacaaatctactattta
aaatctcatcataatgttattgtggcctga
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