Pieris rapae (cabbage white): 111004406
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Entry
111004406 CDS
T05162
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
111004406
03036 Chromosome and associated proteins [BR:
prap03036
]
111004406
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111004406
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
111004406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Suf
HAT_PRP39_N
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
111004406
NCBI-ProteinID:
XP_045486911
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All DBs
Position
14:2972499..2991143
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AA seq
888 aa
AA seq
DB search
MAIVEDEVRNGSEGEDEIEVVVEEEDGDQDSDDSDDDDDDEVEDAMEKVNELERRIEEDH
YNYDDHISLIQALWRLSDLDRWRAAFDRLQNTLVLRPEHWLLRIQTEESLAHTSEAQAEI
VNLFKLATLDCYSISILSEWYSWSLSINDVTEVRGQLEEVLRRAGADPLSGKAFWDARYE
MEKAQLEAMSEDDSEYETQKKRVLWCLEETLSRPLIRGEEVWQPMEELALQLYDQEYVDK
IKKVHEVAVEYLQKISGFEDKLLVIEDVEEKYKMYQEYIDTVKDLSQNEKYSECDSNGIL
KVLYDRATTECLTSSQSHDLLLAYARHVQRTSSRETIRRVLDSCTRRCPRKSTFWVLKMQ
QAEHENKEFDEVKTIFETALSKGMDSYKEAETLWLSYCEYTRRKTAFDNEPEVERLRSTF
RLAWDSLAEAWGEEANDCEVPLFWARLEYKRMKDPKQGKEIFEEIFKYGENKTLSKYWEA
LIYLEKCREPPANERRLRELHRRALRSVTDYPPTLVRLWTDFERDTGELQTMLECSELCQ
AKVKEWRDNYQAMKEKMTGQKQKGKQTQNKKGKIDKRKQTNPQGKRKSGETPEGSDVKRK
REGDMEVEESEGNKDRGSGTKRRHDDDDEGDNKRQRKESTSETKRFGTREACTLFVSNLE
FKVDEKGLREKLSEFGKIVSMRVKAGVKAFGGSICYCQYETPESVDEAVKHDRLPLNGRP
MFLSRYTATKSTPTFKYPTDVERNKLFVKNLPFSHCTKEALTEIFDKHGALKDVRVVTFK
DGKPKGLAYIEYEDEASANTALDKTNGLLVADRKIDVAISAPPPKKDAGQVSLGLPKRDT
GGGMRRTQLSSFIPSVLQKASTSNGKGSANGDKRPLSNHDFRNLLLKK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgttgaagatgaagttcgtaatggatcagaaggagaggatgaaattgaagtg
gttgtcgaagaagaagacggtgaccaagattctgacgattcagacgatgacgatgatgat
gaagttgaagatgctatggagaaagtaaatgaattagaaaggagaatagaagaagaccat
tataattatgacgatcacataagtttaattcaggcgttatggcgcttatcagacttagat
cgatggagagctgcatttgatagacttcaaaatactttagtgctaagaccagaacattgg
cttctgagaattcaaactgaagaatcattagcccatacaagtgaagctcaggcagagata
gttaatctttttaagctggctacccttgattgttattccatatctattttaagtgaatgg
tactcatggtcattaagcattaatgacgtaacagaagtgcgtgggcaacttgaagaggtg
ttacgacgtgcaggtgctgatccactttcaggaaaagccttttgggatgcccggtatgag
atggaaaaagcccaacttgaagccatgagtgaagatgattcagagtatgaaacacaaaag
aagcgtgtactatggtgcttggaagagacattgtcgcgaccgcttatcagaggtgaggaa
gtgtggcagccaatggaagaattagcactacaattatatgaccaggagtatgtggataag
ataaaaaaggtccacgaagtggctgttgaatatttgcagaaaataagtggatttgaagat
aaattattggttattgaggatgttgaagaaaaatacaaaatgtaccaggagtatatagat
acagtgaaggacttatcccaaaacgaaaagtattcggaatgcgacagtaacggtatacta
aaggttttatatgatcgtgcgactacagaatgccttacgtcgtctcaatcgcacgatctg
ttactcgcgtacgcgcgtcacgtgcaacgtacatcgtcacgtgagacgatacgtcgcgtg
ctagactcgtgcacgcggagatgtccacggaaatcaaccttctgggtgctgaagatgcag
caggctgaacatgagaataaggagtttgacgaggtaaaaactatattcgaaacggctcta
tcaaaaggaatggattcgtacaaagaagctgagaccctatggttgagttactgcgaatat
acacggcggaagacggctttcgacaatgaaccggaagtagaaagactaaggtccacgttt
cgactcgcttgggattcattggccgaggcttggggcgaagaagccaatgattgtgaagta
ccactgttctgggctagactcgaatacaagagaatgaaagacccaaagcaagggaaggag
atatttgaagaaatatttaagtacggtgaaaataaaaccctatctaaatactgggaagcc
ttaatatacttggaaaagtgccgagagccaccagccaacgagagacggttgcgcgaatta
catcggcgagctttacgaagtgtcacagattatccaccgacacttgttcgtctctggaca
gactttgaaagggatactggcgagctacagactatgttagaatgttcagagctgtgtcag
gctaaagtaaaagaatggcgagacaactatcaagcgatgaaagaaaagatgacgggtcaa
aaacaaaaaggaaaacagacacaaaacaaaaaaggaaagatagacaaaagaaagcagaca
aaccctcaagggaaaagaaagtcaggggaaacacctgaaggtagtgacgtgaagaggaaa
agagaaggagatatggaagtggaagagagcgaaggaaataaagacagggggagcgggacg
aaacgacgtcatgatgatgatgatgaaggtgataataaacgccaacgtaaagaaagtacg
agcgagacgaagcggtttggtacgagagaggcttgtactctatttgttagcaatctcgag
ttcaaggtagatgaaaaaggcctacgtgaaaagttatctgagttcggtaaaattgtgtca
atgagggtaaaagctggagtcaaagctttcggtggatctatatgttactgccagtatgaa
acgccggaatcagtagacgaagcagtaaaacatgaccgtttaccgttaaacggtagaccg
atgttcctttcgcggtatacggcgacgaaaagtacacccacattcaaatatcccaccgat
gttgagaggaataagttgttcgtaaagaatttaccattttcccattgcactaaagaggct
cttactgagatatttgataaacacggtgctttaaaggacgtacgagtcgtcactttcaaa
gatggaaaacccaaaggccttgcatacatagagtatgaagatgaggcatcagcaaacacg
gcgttggacaagacaaatggtctactagtcgccgatcggaagatagatgtcgctataagc
gcacctccgccaaagaaagacgcagggcaagttagtctcggcttgcccaaacgagatacg
ggaggaggaatgagacggacacagctcagtagtttcattcccagcgtgcttcaaaaggca
tccacaagtaatggcaaaggctcagccaatggcgacaaacgaccgctctcaaaccacgac
tttagaaatcttctgctcaaaaagtga
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