Pandoraea pnomenusa: X636_00910
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Entry
X636_00910 CDS
T02950
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
prb
Pandoraea pnomenusa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
LptD
Motif
Other DBs
NCBI-ProteinID:
AHB74163
LinkDB
All DBs
Position
complement(3268976..3272686)
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AA seq
1236 aa
AA seq
DB search
MSVVSRKPRRVSRRVKSAQPPSATPALHDVRHPLSRPTRHAMGARIVRTATSTAVALALA
GTAPSLWAAGTCTVSDISGCGAAGGDGASGRGGPGGAGNGQGGGSSTIDSNSVTVQVPGG
WAPQGTGGTGASGDGGTSSGGAPAQVVFSSGFVVNGPVVGPGGLAGADGTNFASGGNGGG
AGLYYLGDDITVSSAGAIVGGAGGQGGNASAGVGNGGGGGGGGAGMISAGVVTSISNSGT
ISGGAGGNGGAGGFSGGGGAGGDGILSLQGSANIFNIGTISGGAGGAAGSATFAGGTAGS
GGIGVNLAGTRNSVANIGTISGGAGLVGGVGVRTRGMDIITNAGVIMGGMSNGGAPRAAA
IEFGGLNNGLNLLTGSAILGDLLFDAGASATISASNAGLTLNNAVVLSDAASNVIFSTAT
NSLTMSGVVSGAGALTLGGIASKALTLTSANTYTGATTINSGTLALSGSGSVAASAGVTV
VGVGGVGGVFDISGVSAGASIQALSGGGAVQLGSQTLSLTNAAGTFDGVIGGTGGIRLAG
GTQTLTGVNTYSGATTINNGAVLALSGGASIASSSGVANNGTLDISATTNGASLTALTGP
GSVALGARTLTLTNASGVFSGAIGGTGGLTLNGGTQTLAGVNSYTGATTINGGTLALAAG
GQLSSATTLSLVGSGATFDASGAGAQTLSGLSGGAGTSIAIGTSTLTLDTVTNTTYAGAL
TGSGAFVKQGAGMLVLNGASNGFTGATTVGAGTLEVGDAAHESAVLGGNVAVGSQGTLRG
HGTILGSVTNGGIVAPGGSIGTLSVGGNYTQASSATLAIEVSPTAASLLKVSGSATLNGV
LAITYDPGTYRSTRYTVLSAANGVSGRFSSVTEALSAGADLGNLRSALSYGANDVTLALN
APGTADPGAVDPSGGVVIAPKNTSIFTALGTASLMNAQSATAAVLDQATRRTVETGLATG
DAASGGPSVWASATGLHGRLSGSDGQPGFQENRYGFLAGAHKRVERNTFGLAGGYSHADL
SETGTANSGTIDTLRLAAYASREMGPIDVAATVGYGLDFLSQKRPFAGIGTAQGDHVGQE
FTAAAQVSAPMSIAGIVVTPRAGLRYAYFHANGFDESDAGGQNLRVGTDNTRSLQPFVGV
TLDKAFGDALRPMHVQVRAAYAHELLDAGRAITVASQDGTIFVAPGTHLARGYLTLGASF
GVTLARHLDVSLAYDALVNTARASAQAGSLKVTYRF
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atatccgtggtctcacgcaaacccaggcgcgtatcgcgccgtgtcaaatccgcccagcct
ccgtccgcgacgcccgcgctgcacgacgttcgccatccattgtcgcggccgacgcggcat
gccatgggggcacgaattgttcgcactgcaaccagtacggcggtcgcactggcgctcgcg
ggcaccgcgccgtccctatgggccgccgggacttgtaccgtcagcgacatcagcggctgt
ggtgcggcgggcggcgacggagcctcgggacgcggcggaccgggcggcgcgggcaatggc
caggggggcggttcgagtacgattgattcgaacagcgtgacggtacaggtccccggaggc
tgggcgccacaggggacgggcggcacgggggcttccggcgacggcggcacgtcttcgggc
ggagcgcctgcacaggtcgtcttctccagcggctttgtggtcaacgggccggttgtcggc
cctggaggcctcgccggggccgatggcaccaattttgcatccggcgggaacggcggcggc
gcaggactctattacctgggtgacgacatcaccgtctcgtcggcgggcgcgatcgtcggc
ggcgcgggtggtcagggcggcaacgcctcggcaggcgtcggcaacggcggcggcggcggt
ggcggcggggccgggatgatctctgccggcgtcgtgacatcgatcagcaattcggggacg
atttcgggcggcgctggcggtaacggcggcgccggcggcttcagcggcggcggtggcgct
ggcggggatgggatattgtcgctccagggaagcgccaacattttcaatatcggaacgatc
tcgggcggtgctggaggcgctgcgggtagtgccacgttcgctggaggcacggcgggtagc
ggcggtatcggcgtcaatctcgcaggaacacgcaactcggtcgccaacatcgggacgatc
tcgggcggtgccggtctggtgggcggcgttggcgtgcgcacgcgcggcatggacatcatc
accaacgctggcgtcatcatgggtgggatgtccaacggcggcgcgccgcgagccgcggca
atcgagtttggcggcctgaacaacggtctgaacctgctgaccggctcggcgattctcggc
gacctgctgttcgatgcgggtgcgagcgcgaccatcagcgccagcaatgcggggctgacg
ttgaacaatgccgtcgtgctcagcgacgcggcgtcgaatgtgatcttctccaccgcgacg
aacagcctgacgatgtcgggcgtggtctccggcgcgggcgcactgacgctcggggggatc
gcctcgaaggcgttgacgctcacgtcggccaacacttacaccggcgccaccacgatcaac
agcggcacgctggccctgtcgggcagcggcagtgtcgccgcttcggcaggggtcaccgtc
gtcggcgttggcggcgtggggggcgtgttcgacatttcgggcgtgagcgccggtgcgtcg
atccaggcgctttccggggggggcgccgtgcagctcggcagccagacgctatcgctcacg
aacgcggctggaaccttcgacggtgtcatcggcggcaccggtggcatacgtcttgccggc
ggcacacagacgctcactggcgtgaacacctactcgggcgccaccacgatcaacaacggg
gcggtgctggcactgagcggcggcgcgagcatcgcgtcgtcgagcggtgtggccaacaat
ggcacgctcgatatttccgccacgacgaatggtgcctcgctgacggccctgaccgggcct
ggctcggtcgcgctcggggcgcgcacgctgacgctcacgaatgcgtcgggtgtattctcc
ggcgcgatcggcggcacgggcggattgacgctgaacggtggcacgcagacgctggccggc
gtcaacagctacaccggcgcgaccacgatcaacggcggcacgctggcactggcggcgggc
ggacagttgtcgtcggccacgaccctctccctggtcggcagcggcgcgacattcgatgcg
tccggcgcgggcgcgcagacgctctccggcctgtccggaggggcaggcacaagcattgcc
attggcacgagcaccctgacgctcgatacggtcaccaacacaacgtatgccggcgcactc
accggcagcggcgccttcgtcaaacagggcgcgggcatgctagtgctcaatggcgcgagc
aatggattcaccggggcgaccaccgtgggtgcgggcacgctcgaggtcggtgatgccgct
cacgagagcgcggtactgggcggcaacgtggcagtcggttcgcagggcacactgcgcggt
cacggcacgattctgggcagcgtgaccaacggcgggatcgtggcgccgggcggttccatc
ggtacgctgagtgttggcggcaactacacgcaggcgtcgagcgcgacgctggccatcgag
gtgagtccgacagcggcgtcgttgctcaaggtgtcgggcagcgcgacgttgaatggcgtg
ctcgccatcacgtacgatccgggaacctaccggtcgacgcgctacaccgtgctgagcgcc
gcgaacggtgtgagcggacgcttctcttcggtaaccgaagcgttgtccgccggtgccgac
ctcggcaatctgcgctccgccctgagctacggcgcgaacgacgtgacgctcgcgctcaac
gcgccggggaccgcggaccccggggccgtcgatccgtcaggaggcgttgtcatcgcgccg
aagaacaccagcattttcacggccttggggaccgcttcgctgatgaacgcccagtcggcg
acggcggcggtgctcgaccaggccacgcgccgcactgtggagacgggattggccaccggt
gatgcggcatctggcggcccttcggtctgggcgagtgcgacgggacttcacggccgtctg
tccggttccgacggtcagcccggttttcaggagaaccgttacggcttccttgcgggcgcg
cacaagcgcgtggagcgcaacacgttcgggctggctggcggctattcgcacgccgatctc
tcggagaccggcacggcgaactcgggcacgatcgacacgctacggctggccgcgtacgcc
agtcgcgaaatggggccgatcgacgttgcggcaacggtaggctacgggctcgatttcctg
tcgcaaaagcgccccttcgcaggcatcggaaccgcgcaaggggaccatgtcggacaggag
ttcacggcggcggcgcaggtgagcgcgccgatgtcgattgccgggatagtcgtcacgccg
cgcgccggcctgcgctacgcctattttcatgcgaacggtttcgacgaaagcgatgcgggc
gggcagaatctgcgcgtgggcacggacaatacccgcagccttcagccgttcgttggcgtg
acgctcgacaaggcgttcggagatgcgctgcggccgatgcacgtgcaggttcgcgcggcg
tatgcacatgagttgctcgatgccggtcgggcgattaccgtggcgtcgcaggacggcacg
atcttcgtcgcaccgggcacgcatctggcgcgcggctatctgacgctcggcgccagcttc
ggtgtaacgctcgccagacacctggacgtctcgctcgcgtacgacgccctcgtcaacacc
gcacgggcgtcagcgcaggcgggaagcctgaaggtgacctaccggttctga
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