Pandoraea pnomenusa: X636_01035
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Entry
X636_01035 CDS
T02950
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb00061
Fatty acid biosynthesis
prb00071
Fatty acid degradation
prb01100
Metabolic pathways
prb01212
Fatty acid metabolism
prb02024
Quorum sensing
prb04146
Peroxisome
Module
prb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
X636_01035
00071 Fatty acid degradation
X636_01035
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
X636_01035
09145 Cellular community - prokaryotes
02024 Quorum sensing
X636_01035
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prb01004
]
X636_01035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prb04147
]
X636_01035
Enzymes [BR:
prb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
X636_01035
Lipid biosynthesis proteins [BR:
prb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
X636_01035
Exosome [BR:
prb04147
]
Exosomal proteins
Exosomal proteins of breast milk
X636_01035
Exosomal proteins of breast cancer cells
X636_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHB74188
UniProt:
A0A378YH16
LinkDB
All DBs
Position
complement(3301036..3303009)
Genome browser
AA seq
657 aa
AA seq
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MQERTTFPRLLLAHAATRGTRTAYREKDLGIWQCWSWQEAAHEVRMLACALAAAGFRRGD
NLAIVGNNRVRLYWAMTAAQALGGVAVPLYQDAVAAEMVHVLQDAEIDFAIVEDQEQVDK
LLELRDQVPRLSNIIYEDPRGLRGYDAPGLRAYEAALEQGREFNARHPRFFDDAVAAGDP
DDTATILYTSGTTGKPKGVCHSHAGLIGAAYHGSTFDRLGPGDEVLSYLPMAWVGDHLFS
YAQALVAGFTVNCPESPDTIATDMREIGPTYYFAPPRVYENVLTQVMIRMEDASGLKRRM
FSHFMDVANRCGAAVLDRRPVALLDRVQYAIGNLCVYGPLRNTLGMSRIRTAYTAGEAIG
PDLFRFYRAIGVNLKQFYGQTETCAYVCLQPDRQVRFDSVGPVAPGMEIRIGESGEVLVR
GVGLLKAYYKRPDATREALDDDGYFRTGDAGIIDDDGHLRIIDRAKDVGKLACGSLFAPK
YIENKLKFFSYIKEAVAFGDGRDGVCAFINIDFDAVGNWAERQNLAYAGYIDLATHARVA
ELILGCVESVNADLAREAAFSSAQIQRFVILHKELDPDDDELTRTRKVRRAFIAQKYEVL
VDAFYSGKSTQFIETRVKFEDGREGSVSATLAIHPARVIGARAPVDDPAPVKLRCAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcggaccacctttccgcggttgttgctggcgcacgccgcaacgcgcggcacc
cgcacggcgtatcgggaaaaagatctgggaatctggcagtgttggagctggcaggaagcc
gcacacgaagttcgcatgctggcgtgcgcgctggccgccgccggcttccgtcgcggcgac
aatctcgccatcgtgggcaacaatcgcgtgcgtttgtactgggccatgacggccgcgcaa
gcgctcggcggtgtggccgtaccgctgtaccaggacgcggtcgccgccgaaatggtgcac
gtcctccaggatgccgagatcgatttcgccatcgtcgaagatcaggagcaggtcgacaag
ttgctggaactgcgcgatcaggtgccgcgcctgtcgaacatcatctacgaagacccgcga
ggcctgcgcggctatgacgccccgggtttgcgcgcctacgaagccgcgctcgagcagggg
cgcgagttcaacgcgcgacatccccgctttttcgacgacgcggtggccgccggcgatccc
gacgacaccgccaccatcctttacacctcgggcacgaccggcaagcccaagggggtgtgc
cattcgcatgccgggctcatcggtgcggcgtatcacggcagcaccttcgatcggctcggc
ccgggcgacgaagtattgtcctacctgccgatggcgtgggtcggggaccatctcttctcg
tatgcgcaggcgctcgtggcgggtttcaccgtcaattgccccgagtcgcccgacacgatc
gccaccgacatgcgcgagatcggcccgacctactacttcgcgccgccgcgggtctatgag
aacgtgctcacgcaagtgatgatccgcatggaagacgcgagtggcctcaagcgcaggatg
ttctcgcacttcatggacgtggccaaccgttgcggcgcggcggtgctcgaccgccgtccg
gtcgcgctgctcgatcgcgttcagtacgcaatcggcaatctctgcgtgtacggcccgctt
cgcaacacgctcggcatgagccggattcgcaccgcctacacggcgggcgaggccatcggc
cccgatctgtttcgcttctatcgcgccatcggcgtgaacctcaagcagttctacgggcag
acggagacgtgcgcatacgtctgcctgcaaccggatcgccaggtgcgattcgacagcgtc
ggcccggtcgccccgggcatggaaatcaggatcggggagagcggcgaggtgctggtgcgc
ggcgtgggactgctcaaggcgtactacaagcgccccgacgccacgcgcgaggcgctggac
gacgacggctatttccgcacgggcgatgccggcatcatcgacgacgacggccacctgcgc
atcatcgatcgcgccaaggacgtcggcaagctcgcctgcggctcgctcttcgcaccgaag
tacatcgagaacaagctcaagttcttctcctacatcaaggaggcggtggcgttcggcgac
ggacgcgacggcgtttgcgccttcatcaatatcgactttgacgccgtgggcaactgggcg
gagcggcagaacctcgcttacgccggctacatcgacctagctacccatgcccgcgtggcc
gagctgatcctcggttgcgtggaatccgtgaacgccgatctcgcccgggaagccgccttt
tcatccgcgcagattcagcgcttcgtgatcctgcataaggaactcgatcccgatgacgac
gagctcactcgcacgcgcaaggtgcgacgcgcattcatcgcccagaagtacgaggtactg
gtcgatgcgttctattccggcaagtcgacgcagttcatcgaaacgcgcgtgaagttcgag
gacggacgcgagggcagcgtgagcgccacgctcgcgattcatccggcgcgcgtgatcggc
gcccgggcccccgtcgacgatcctgcgcctgtgaagttgcgctgcgcggcctga
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