Pandoraea pnomenusa: X636_02555
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Entry
X636_02555 CDS
T02950
Name
(GenBank) 3-isopropylmalate dehydratase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb00290
Valine, leucine and isoleucine biosynthesis
prb00660
C5-Branched dibasic acid metabolism
prb01100
Metabolic pathways
prb01110
Biosynthesis of secondary metabolites
prb01210
2-Oxocarboxylic acid metabolism
prb01230
Biosynthesis of amino acids
Module
prb_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
X636_02555
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
X636_02555
Enzymes [BR:
prb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
X636_02555
4.2.1.35 (R)-2-methylmalate dehydratase
X636_02555
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AHB74450
LinkDB
All DBs
Position
complement(3657589..3659601)
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AA seq
670 aa
AA seq
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MEDTIRFDGRILFLSDDPAIVRRQLAGESLARVDAGRLRDNVSTDEITPVTVMLTYDERL
GRYPYVGFKAGNEMPIGEHDVRRGGFQVTVAGKRYGKGSSRESSPLAELSAGIRLIVAES
FERIYQQNCDNIGILTTTDVSVLDRIAAGEPIPITEFLKGRDALTQQIIRSGGLLAFSKF
ADWAAPAIDSDDEANAGDPPARTLVEKIMARRLHPSTPGLAHGDGVFLRVDWRFSHDYFT
GMCAHLMHRAFGEPAALHDPARIIAFQDHLVLAGQSVPHATQGLLPGVANLTSGHRDFVA
RYPVLAHGERAAQGGQAGDGTDGADGADGADGADGICHALMAERYALPGQIVIGTDSHTP
HAGALGCLAFGAGATDVANSWVTGYVRCKVPETLRVEIDGELPAGVTAKDVVLHLLRLDA
IRGGEAIGVVFEYAGSAVRAMSIDERATLTNMVAELGGFTGIVAPDEKTVAFLRTRRGVD
ITLEPWMTSDEGARYRDVIRVDAGSLTPMLARPGDPGNGVALAELVSPVAIDIAYGGSCT
AGKRDDFDAYHAVLAWGVANGLRVADGRRLFLQFGTMDVRAYCEAQGYLATFEAVGATLI
MPGCGACANCGPGQSTSADQVTISAINRNFPGRSGPGSVWLASPYTVAASALAGRIASFE
ELKAAAAVAD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaccattcgtttcgacggtcgcattctgttcctgtccgacgaccctgccatc
gtgcgtcgtcagttggccggtgagtccctcgcccgcgtcgacgccggtcggctgcgcgac
aacgtctcgaccgacgaaatcacgcccgtcaccgtcatgctcacttacgatgagcgtctc
gggcgctacccatacgtcggtttcaaggcgggaaacgagatgcccatcggcgagcacgac
gtgcgtcgcggcggcttccaggtcacggtcgcgggcaagcgctacggcaagggctcgtcg
cgcgaatcgagtccgctcgccgagctcagtgccggcattcgcctgatcgtggccgagagc
ttcgagcgcatctatcagcagaactgcgacaacatcggcattctgaccacgaccgacgtc
agcgttctcgatcgcatcgccgccggcgagccgatccccatcaccgagtttctcaagggg
cgcgacgccctcacgcaacagatcatccgcagcggtggcctgcttgcgttcagcaagttt
gccgactgggcggcgcccgccatcgactcggacgacgaggcgaatgccggcgatccgccc
gcccgcaccctcgtcgagaagatcatggcacgtcggctgcatccgtcgacgcccgggctc
gcccacggcgacggcgtattcctgcgcgtggactggcgcttctcgcacgactacttcacg
ggtatgtgcgcgcatctgatgcaccgtgccttcggtgaaccggcggcattgcacgaccct
gcacgcatcatcgcgtttcaggatcacctggtgctggccgggcaaagcgtgccgcacgcc
acgcaggggctgctgccgggcgtggccaatctgacgagcggccaccgcgacttcgtggcg
cgatatcccgtgctggcgcatggcgaacgggcggcgcagggcgggcaggcaggcgatggg
acggatggtgccgatggtgccgatggtgccgatggggcggacggcatttgccatgcgctg
atggccgagcgctacgcgctgcccggacagattgtgatcggcaccgattcgcacacgccg
cacgccggcgcgctgggttgcctggccttcggcgcgggcgcgacagatgtcgccaacagc
tgggttaccggttacgtgcgctgcaaggtgcctgagacgctgcgtgtcgagatcgacggt
gaactgcccgccggtgtcacggccaaggacgtggtgctgcacctgttgcgcctcgatgcg
attcgcggcggcgaggccatcggcgtcgtgttcgaatacgcgggaagcgcggtgcgcgcg
atgtcgatcgacgagcgcgccacgctcaccaacatggtcgcggagcttggcggcttcacc
gggatcgtagcccccgacgagaagacggtggcgttcctccggacccgtcggggcgtcgat
atcacgctcgagccgtggatgacgagcgacgagggcgcgcgctaccgcgatgtgatccgt
gtcgacgccgggtcgctcacaccgatgctggcgcgcccgggcgatccgggcaacggcgtg
gcgcttgccgagctcgtctcgcccgtggccatcgacatcgcatacggcggctcgtgcacg
gcgggcaagcgcgacgacttcgacgcctatcacgccgtgctcgcctggggcgtggcgaat
gggctgcgcgtggccgacggccgccggctgttccttcagttcggcaccatggacgttcgc
gcctattgcgaagcgcagggctatctcgcgacattcgaggcggttggcgccacgctgatc
atgcccggttgtggcgcgtgcgcgaactgcgggcctgggcagtcgacatcggccgatcag
gtcacgatcagcgccatcaaccggaatttcccggggcgttcggggcccggcagcgtgtgg
ctggcgagcccctatacggtggccgccagtgcgctggccggacgtatcgcgagtttcgag
gaactgaaggcagcggctgccgtggcggactga
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