Pandoraea pnomenusa: X636_04785
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Entry
X636_04785 CDS
T02950
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb00730
Thiamine metabolism
prb01100
Metabolic pathways
prb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
X636_04785
Enzymes [BR:
prb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
X636_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AHB74824
LinkDB
All DBs
Position
4125402..4127318
Genome browser
AA seq
638 aa
AA seq
DB search
MNANPKFLSANARVDEAAIAPLPNSRKIYVQGSRPDIQVPMREISQADTPTSFGGEKNPP
IYVYDTSGPYTDPNAKIDIRSGLPALRAAWIEARGDTEALPGLTSAYGRERAADAATAEL
RFPGLHRTPRRAKAGKNVTQMHYARQGIITPEMEYIAIRENLRRQEYIESVRQTGPQGER
LAKLLSRQHPGQHFGASIPAEITPEFVRSEIARGRAIIPNNINHPESEPMIIGRNFLVKI
NANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPI
YQALEKVNGKAEELTWEMFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTANRMTGIVSRGG
SIMAKWCLAHHKESFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIYDANDEAQLSELRTL
GELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLEYCDEAPFYTLGPLTTDIAPGYDHI
TSGIGAATIGWYGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGSQIR
DNALSKARFEFRWEDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQD
VRDYAAKQGITDEAALKQGMEVKAVEFVKSGAEIYRRT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaacccgaagttcctctcagccaacgcgcgcgtggacgaagccgcgatcgca
ccgctgccgaattcccgcaagatctacgtgcaaggctcgcgcccggacatccaggtgccg
atgcgtgaaatctcgcaagccgacaccccgacgagcttcggcggcgaaaagaacccgccg
atctacgtgtacgacacctcgggcccgtacaccgatccaaacgccaagatcgacatccgc
tccggcctgccggccctgcgtgccgcatggatcgaagcgcgcggcgacaccgaagcgcta
ccgggcctgacctcggcctacggccgcgagcgggccgccgacgccgcgaccgcggagctg
cgcttcccgggcctgcatcgcacgccgcgtcgcgccaaggccggcaagaacgtgacgcag
atgcactacgcgcgtcagggcatcatcacgcccgaaatggaatacatcgcgatccgcgaa
aacctccgccgtcaggaatacatcgagagcgtgcgccagacgggcccgcaaggcgagcgt
ctggccaagctgctctcgcgccagcatcccggccagcatttcggcgccagcatcccggcg
gagatcacgccggaattcgtgcgcagcgaaatcgcacgcgggcgcgccatcatcccgaac
aacatcaaccacccggaatcggagccgatgatcatcggccgcaacttcctcgtgaaaatc
aacgcgaacatcggcaactcggccgtgacgtcgtcgatcggcgaggaagttgacaagatg
acgtgggcgatccgctggggcggcgacacggtgatggatctgtcgaccggcaagcacatc
cacgaaacgcgcgagtggattctgcgtaacagcccggtgcccatcggcaccgtgccgatc
tatcaggcgctcgaaaaggtcaacggcaaggccgaggaactgacgtgggaaatgttccgc
gacacgctcatcgagcaggccgagcaaggcgtcgactacttcacgatccacgccggcgtg
cgtctcgcctacgtgccgatgacggccaaccgcatgaccggcatcgtcagccgcggcggc
tcgatcatggccaagtggtgtctcgcgcatcacaaggaaagcttcctgtacacgcacttc
gaagaaatctgcgaaatcatgaaggcgtacgacgtcgccttctcgctgggtgacggcctg
cgccccggctcgatctacgacgccaacgacgaagcgcagctctccgaactcaggacgctg
ggcgaactcacccagatcgcgtggaagcacgacgtccaggtgatgatcgaaggcccgggc
cacgtgccgatgcaactcatcaaggagaacatggatctccagctcgagtactgcgacgaa
gcgccgttctatacgctcggaccgctcacgacggacatcgcgccgggctacgaccacatc
acgtcgggcatcggtgcagcgaccatcggctggtacggcacggccatgctgtgctacgtc
acgccgaaggaacacctgggtctgccgaacaaggacgacgtcaaggaaggcatcatcacg
tacaagctcgccgcgcacgccgccgatctcgccaagggccaccccggttcgcagattcgc
gacaacgcgctgtcgaaggcgcgtttcgaattccgttgggaagaccagttcaacctgggt
ctcgatccggacaaggcacgcgaattccacgacgaaacgctgccgaaggattcggccaag
gtcgcgcacttctgctcgatgtgcggtccgcacttctgctcgatgaagatcacgcaggac
gtgcgcgattacgcggccaagcaaggcatcacggacgaagccgccctcaagcagggcatg
gaagtcaaggccgtcgagttcgtcaagagcggcgccgagatctatcgccgtacctga
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