Pandoraea pnomenusa: X636_04800
Help
Entry
X636_04800 CDS
T02950
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X636_04800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_04800
Enzymes [BR:
prb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
X636_04800
DNA repair and recombination proteins [BR:
prb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X636_04800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
SH3_13
SLFN-g3_helicase
AAA_22
RecD_N
Herpes_Helicase
PhoH
DEAD
nSTAND3
CbiA
AAA_25
UvrD_C
AAA_28
T2SSE
MukB
TraI_hel_assoc_N
DUF4350
AAA_16
Flavi_DEAD
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
AHB74826
LinkDB
All DBs
Position
complement(4130346..4132544)
Genome browser
AA seq
732 aa
AA seq
DB search
MNELRRTADTPSGAQADSGVVRLAQGFARRMALLAKGNGADEVTCRYVWRASLAVSLATA
EGHVCVPLGDLLDTQASGELFPGDAPSLAVWREALFASGLCARASLAHALTNHAPTGAST
GASTIDAPAEAFPLLLDERDRLYLARYYGYEARLATALGRKLSTGQRMAVTSEDRARLRR
YFGEGVLTGADGQPEPNWQMAAAALALQRSLVVLSGGPGTGKTTTVVGLLACLLERDADL
RVALAAPTGKAAQRMQEALTARQDLPETVRQALPEVALTLHRLLGVLPESADQVGRRFRH
HAGNPLPYDLIVVDEASMIDLSMATQLLEAVPEGARLILLGDKDQLAAVEAGAVFGELSA
QRAFSPQMRSRLLDALGWPRDRPPLTGPLARPGAQGQGGVDATADDAEAANTQHTQRARG
LEDAVVWLERTYRFGAHSAIGRLATAIKAGKVIEARKECVAPDTVQMAEVVDMTEMAGAD
RVTLTEDGGIQLSPTNLNALADGYSAYLDALTQAFETIDRLGDPAAASVADVAMVAQPVF
AAFGQFRVLCATRGARRGVEFLGAQLTAVLARRAGVALGAGGGAWFAGRPVLVTQNEYAL
NLFNGDIGIALPLGPSGTLRVAFATPDGGYRLYSPASLPAHETAFAMTIHKSQGSEFDRV
AIVLPEQASRVLSRELIYTGVTRARRQAALYAPWPVIASAIARPTQRDGGLTDRLREVLA
TMPASPPQSRLP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagctgcgtcgcaccgccgacacgccgtcgggggcgcaagccgacagcggtgtc
gtgcgtctcgcgcaaggtttcgcacgccgcatggccctgctcgccaagggcaacggcgcc
gacgaggtgacgtgccgctatgtctggcgtgcctcgcttgccgtaagcctcgcgactgcg
gaaggtcatgtgtgcgtgcccctcggcgacctgctcgacacccaggccagcggcgagttg
tttcctggcgacgccccttcgctggccgtctggcgagaggcccttttcgccagtggtctg
tgcgcgcgggcaagcctcgcgcatgcattgacgaaccatgcgcccacaggcgcgtcgact
ggcgcgtcgacgatcgatgcgccggccgaggcgtttccgctgttgctcgacgagcgcgat
cgtctctatctggcgcgctattacggctacgaggcgcgtctggcgacggcgctcgggcgc
aagctgtcgactgggcagcgcatggccgtcacctccgaggaccgcgctcgcctgcgacga
tacttcggcgagggggtgctgacgggggcggacggacaaccggaaccgaactggcagatg
gcggctgccgcgctggcgctgcaacgctcgttggtggtgctcagcggcggccccggcacc
ggcaagaccacgacagtggtcggtttgctagcctgcctgctggagcgcgacgccgatctg
cgcgtcgcgctggcggcgcccacgggcaaggccgcgcaacgcatgcaggaggcgctcacc
gcgcgccaggatctgcccgagaccgtgcggcaggcgctgcccgaggtggcactcaccctg
caccgtctgctcggcgtgcttcccgagtccgcggatcaggtcggacgtcgcttccggcat
catgcgggcaatccgctgccctacgatctgatcgtggtggacgaggcatcgatgatcgac
ttgtcgatggcgacgcaactgctggaagccgtgccggagggcgcccgtctgattctcctg
ggtgacaaggaccaattggcggccgtggaggccggggcggtcttcggcgaactgagcgcg
cagcgtgcgttttcgccacagatgcgttcgcgtctactcgacgcgctggggtggccgcgg
gatcgtccgccgctcacggggccgttggccaggcctggtgcgcagggtcaaggcggtgtc
gacgcaactgccgatgatgccgaagcggcgaacacgcagcacacgcagcgcgcccgcggg
cttgaagatgcggtggtctggctcgaacgcacctatcggttcggtgcccactcggccatt
ggccgactggctaccgccatcaaggcgggcaaggtcatcgaggcgcgcaaggagtgtgtc
gcgccggacaccgtccagatggcggaagtggtggatatgacggaaatggcgggggcggac
agggtgacgctgaccgaggacggcggcatccagttgtcgccgacgaatctcaatgcgctc
gccgacgggtattcggcttacctcgacgcgctgacgcaggccttcgagacgatcgatcgg
ctcggcgaccctgcggcggcgagtgtcgctgacgtcgccatggtcgcgcagccggttttc
gccgccttcggacaattccgcgtgctgtgcgccacgcgcggcgctcgccgcggcgtcgag
ttcctcggcgcacaactgacggccgtgctggcgcgacgcgcgggcgtcgccctcggcgct
ggcggcggggcatggtttgcggggcgtccggtactggtcacgcagaacgagtacgcgttg
aacctgttcaacggcgacatcggcatagccctgccgctcggtccgtccggtacgctgcgt
gtggcgttcgccacgccggacggcggctaccgactgtactcgccggcaagcctgcccgca
cacgagaccgcgttcgcgatgacgattcacaagtcgcaaggctcggagttcgatcgcgtc
gcgatcgtcctgcccgagcaggcgagccgcgtgctctcgcgggaattgatctacacgggc
gtgacgcgtgcccgccggcaagccgcgctttatgcgccgtggccggtcatcgcatctgcc
atcgcgcggccgacgcagcgcgacggcggcttgaccgaccgcttgcgcgaggtgttagct
acgatgccggcttcgccgccgcaatcgcggcttccgtga
DBGET
integrated database retrieval system
