Pandoraea pnomenusa: X636_04810
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Entry
X636_04810 CDS
T02950
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X636_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_04810
Enzymes [BR:
prb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
X636_04810
DNA repair and recombination proteins [BR:
prb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X636_04810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHB74828
LinkDB
All DBs
Position
complement(4136425..4139841)
Genome browser
AA seq
1138 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDLAQAPGQGDAAANPFDTETIVVPSVAVRRRLELDYADIFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVRSSPRLAGYLAG
ADDVMRFELAERLAHIYDQYLTYRPNWLERWQAGEPIDAGTAPGWGQVQRDDEAWQSALW
RKVLAHLDIRERHPTLRAIDRIEQLTPETVPHGWPRRVSVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTRRDGAAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPAPTLLAALQNGILTLDDGRHGTTQGGGADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLARAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAQRYDLGGNVLDAIQNWLHAAGARRGWRG
DALLRLEAPRQAADGDGEMAPALERHTLGDAMMRLFLGYALPDDALPVDDWLPVGGIEGG
RAELLGQLARLIDDLDMTSVALRTERTGLEWRDQLLAMLEQFFSDETRFADDVAEVRMAI
EQIGSAIADGAPEVRVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLPYRVVCM
IGMDDGVLPGRVRADEFDLMRVLPQRGDRQRRDDERNLFLDLMLSAQDRFLITYTGRSVR
DNAPLPPSTAVDELLDFTGQLLAPVSAGYTLEAQREARDALIVLHPLQPFSPAYFDGRDA
SLFSYDVSNGDAARALADPLAVPASDVPEAPFVREALPAVAQTHLTLDDLLRFWRHPGRA
WARDRLGLSLGEMLTEVEDDEPFVLDWAGRDALASRLLPRLLRDDARDARHHAEAVERIA
RVSHELPGGATGAVWRRRELGGLRALAAQVREAQAEGTQELLVALPLTPALPPSWKASTP
AAWHGDATLSAQCLLQGRLAPVSRYGLVMYRYGSMRPSDLLAAWLAHLALCAHLQQSAHA
GLDVAPRTLWYGENETFALRPVEDAAALLAQWVALYRLGQTRPLPFFARSAWKLASTGKA
AEAESAWQGSAFARGDADDPYTRLLWRGVENPLAPPFDLLANTVFGPVVQHLEVVEGA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgctccacctattcttttccaaccggttcaccacgctcgaagccgccttgctgcgcgat
ctcgcgcaagcgcccggccagggcgacgccgccgcgaatcccttcgacacggaaaccatc
gtcgtgccgagcgtggcggtgcggcgtcggctcgaactggactacgcggacatcttcggc
gtatgcgcgaacgtccggctgacctacctcgcccagtggctctgggacatggcgggcaag
ctgctcacggtgccggagagttcgccgttcgcgccggaccggctcgtctggccgctgtac
cagtgcctggcccagccgtgggtcaggagctcgccgcgtttggccggctatctggccggc
gccgacgatgtcatgcgcttcgaactggcggagcgtctggcgcacatctacgaccagtat
ctgacctatcggccgaactggctcgagcgttggcaggccggcgagcccatcgatgccggc
acggcgccgggctgggggcaggtgcagcgtgacgacgaagcgtggcagagcgcgttgtgg
cgaaaggtgctggcgcatctggacatccgcgagcgtcatcccacgctccgggcgatcgac
cggatcgaacaactgacaccggaaacggtgccccatggctggcccaggcgtgtgtcggtg
ttcgcactgtcgtcgatgccgccgttgtcgatggcgctgctcaaggcgatgtctcgcctg
atcgacgtccatctgtacgtcctcaatccgtgcgagagctattggttcgacatcgtcccg
ccgtcgcgtctgtcgtatctcacgcgccgcgatggcgcggcgcaccgggaggtggggcat
ccgttgctggccgagtggggtcgccagacgcagtcccacatcgacgcgctgtatgccgat
ctcgcgccacaggcggtcgaggaccgggcgctgttccaacccaatcctgccccgacgctg
ctcgccgccttgcagaacggcatcctcacgctggacgacggccgtcacggcaccacgcag
gggggcggcgccgatggttcggtgcaggtgcatgtgtgccacagtctggcgcgccagatc
gaggtgcttcacgaccggctgcttgcctgcttcgacgaaattcccgatctgcggcccgac
gacgtgctgatcaccgtgcccgatctggcgcgcgcggcgccgctcatcgacgccgtattc
gggaccgccacgcctcgcattccctatctcgtgacgggcctgccgcccacgcgcaccaat
ccggtcgcgcgcgccttcgcttccatactggcattgccgcagcagcgggtggcggcatcg
agtctcgtggaactggcgcgcacggaagccgtggcgcaacgctatgacctcgggggcaat
gtgctcgatgccatccagaactggctgcacgccgccggcgcacgtcgcggctggcgcggc
gacgcgctgctgcggctggaggcaccgcggcaggccgcagacggcgacggggagatggcg
cccgcgctggagcgtcatacgttgggagacgccatgatgcggctgttcctcggctatgcg
ctgccggatgacgccttgccggtcgacgactggctgccggtcggcggtatcgagggcggt
cgtgccgagttgcttggccagctggcgcgtctgatcgacgatctcgacatgacgtccgtt
gcgctgcggacggagcgcacggggcttgagtggcgcgatcagttgctcgcgatgctggag
cagttcttctccgacgagacgcgcttcgccgacgacgtggccgaggtgcgcatggcaatc
gagcagatcggttcggccattgccgacggtgcaccggaggttcgcgtgccggttgaagtg
gtcgcccgcgtgctggccgacgccctcgacgatcccacgcgcggcggcgtgccctcgggg
cgcgtgacgtttgccgccatcccgagcctgcgtctcttgccgtaccgcgtggtgtgcatg
atcggcatggacgacggtgtgcttccggggcgcgtacgcgccgacgagttcgacctgatg
cgcgtgttgccgcagcgaggcgatcgtcaacgacgcgacgacgagcgcaacctcttcctc
gacctgatgctcagcgcccaggatcgttttctcatcacctacaccgggcgcagcgtgcgc
gacaacgcaccgctgccgccctcgaccgcggtcgacgaactgctcgatttcacgggacag
ttgcttgccccggtatccgcggggtacacgctcgaggcacagcgcgaggcgcgcgacgcc
ctgatcgtgctgcatccgttgcaaccgttttccccggcatatttcgacggtcgcgacgcg
tcgctcttcagctacgacgtgtccaacggcgacgccgcgcgggcgttggccgaccccctg
gccgtgcccgcatcagacgtccccgaggcgcccttcgtgcgagaagcgctgcccgccgtg
gcgcagacgcatctgacgctcgacgacctgctccgcttctggcggcatcccggccgtgcg
tgggcaagggacagactgggactgtcgcttggggagatgctcaccgaagtggaggacgac
gagccgttcgtgctggattgggcgggccgcgatgcgctggcgtccaggctgctgccgcga
ttgctgcgcgacgatgcacgcgacgcccgccatcatgccgaagccgtcgagcgaatcgcc
cgcgtgagtcatgagttgccgggcggcgcgacaggcgcggtctggcgccggcgcgagctg
ggtggcttgcgcgcgctcgcggcgcaggtgcgcgaggcccaggccgaagggacgcaggag
ctattggtggccctgccgttgacgccggcactgccgccgtcgtggaaggcatcgacgccg
gccgcatggcacggtgacgcgaccttgtcggcgcagtgtctgttgcaaggacggctcgca
ccggtttcgcgttacgggctggtgatgtatcgctatggcagcatgcgtccaagcgatctg
ctcgccgcgtggctggcgcatcttgccttgtgtgcgcatttgcagcagagcgcgcatgcc
ggtctggatgtggcgccaagaacgttgtggtacggcgagaacgagacgttcgcccttcgt
cccgtggaagacgcggcggcgttgctcgcccaatgggtggcgttgtaccggctgggccag
acgcgtccgctaccgtttttcgcacgcagcgcgtggaagctggcgagcaccggcaaggcc
gcagaggccgagagcgcctggcagggttcggcgttcgcacgcggtgatgccgacgatcct
tacacgcggctactttggcgcggcgtggagaatcccttggcgccgcccttcgatctgctt
gcgaataccgtgttcgggccggtggttcaacatctcgaagtcgtggagggcgcatga
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