Pandoraea pnomenusa: X636_05415
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Entry
X636_05415 CDS
T02950
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X636_05415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prb03019
]
X636_05415
Enzymes [BR:
prb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
X636_05415
Messenger RNA biogenesis [BR:
prb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
X636_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AHB74939
UniProt:
A0A378YKX3
LinkDB
All DBs
Position
4265058..4266593
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AA seq
511 aa
AA seq
DB search
MIRKLIKKLLGKDGQPRAGATGATGPTPPGTPVVIPVGVHGIDPSLLSKNAVRVTDTLQQ
AGFKAFIVGGAVRDLLLGIAPKDFDVATSATPEQVQRLFRRARIIGRRFQIVHVQFGQEI
IETSTFRALVDAVDSEQIGARRPKKGELDRKTHVTDESGRVLRDNVWGEQEEDAARRDFT
VNAMYYDPAAQTVHDYHHGWEDIQKRVLRMIGDPATRYREDPVRMLRVVRFAAKLGFKID
EATAAPISQLAPLIDNVPAARLFDEMLKLLLSGHAWACVQQLRAQGLHHGLLPLLDVVLE
QPMGEKFVTLALANTDARIRAGKPVSPGFLFAALLWHLVLEKWQAYQRAGEYPIPALHLA
MDDVLDAQTGKLAIQRRFVADMKEIWGLQVRLDKRVGRTPLRLLEHPRLRAGYDFLLLRC
ESGEVPAEAGQWWTDFLEGDAAARDALLAQGSAPSGTPAAKRRRRRRKPTGGRGGEGSGN
EASAGDGNENATSENHGKRVSSRQHGSEGAS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcaaactcatcaagaagctgctgggcaaggacggtcagccccgcgccggcgct
accggcgctaccggcccgacgccgcccggcacccccgtcgtcattcccgttggcgttcac
ggcatcgatccctcgctgctttcgaagaacgccgtgcgcgtgaccgacacgttgcagcag
gccggcttcaaggccttcatcgtgggcggtgcggtgcgcgacctgttgctcggtatcgcg
ccgaaggacttcgacgtcgccacgagcgccacgcccgagcaggtgcagcgtctgttccgc
cgcgcccgcatcatcggtcgccggttccagatcgtgcacgtgcagttcggtcaggagatc
atcgagacctcgacgttccgcgcgttggtcgacgccgtcgacagcgagcagatcggtgca
cgccgtccgaaaaagggcgaactcgatcgcaagacgcacgtgaccgacgaatcgggccgc
gtgctgcgcgacaacgtctggggcgagcaggaagaagacgccgcgcggcgcgacttcacc
gtcaacgccatgtattacgacccggccgcgcagacggtgcacgattaccatcacggctgg
gaagacatccagaagcgcgtgctgcgcatgatcggcgacccggccacgcgctatcgcgaa
gaccccgtgcgcatgctgcgcgtggtgcgtttcgcggccaagctcggcttcaagatcgac
gaggcgaccgccgcgccgatctcgcagctcgcaccgctcatcgacaatgtgcccgccgcg
cggctgttcgacgagatgctcaagctgctgctctcgggccatgcctgggcgtgcgtgcag
caattgcgcgcgcagggcctgcatcacggtctgctgccgctgctcgacgtcgtgctggag
cagccgatgggcgagaaattcgtcacgctcgcgctcgccaacaccgacgcgcgcattcgc
gccggcaagccggtttcgccgggcttcctgttcgccgccctgttgtggcatctcgtgctc
gagaagtggcaggcctaccagcgcgcgggcgagtacccgattccggcgctgcatctggcc
atggacgacgtgctcgacgcccagaccggcaagctcgcgatccagcgccgtttcgttgcc
gacatgaaggaaatctggggcctgcaggtgcgtctcgacaagcgcgtgggccgtacgccg
ctgcggctgctcgaacatccgcgcttgcgtgccggctacgacttcctgctgctgcgctgc
gagtcgggcgaggtgcccgccgaagccgggcagtggtggacggacttcctcgagggcgat
gccgccgcgcgcgacgccctgctcgcacaaggcagtgcaccgagcggtacgccggcggcc
aagcgtcgtcgtcgccgtcgcaagccgacgggtggacggggcggtgaaggatcgggcaac
gaagcgagcgctggcgacggcaatgagaacgccaccagcgagaatcatggcaagcgggta
tcatcgcgacagcatggttccgaaggtgcttcatga
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