Pandoraea pnomenusa: X636_06760
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Entry
X636_06760 CDS
T02950
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb00020
Citrate cycle (TCA cycle)
prb00640
Propanoate metabolism
prb00660
C5-Branched dibasic acid metabolism
prb00720
Other carbon fixation pathways
prb01100
Metabolic pathways
prb01110
Biosynthesis of secondary metabolites
prb01120
Microbial metabolism in diverse environments
prb01200
Carbon metabolism
Module
prb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
prb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
X636_06760
00640 Propanoate metabolism
X636_06760
00660 C5-Branched dibasic acid metabolism
X636_06760
09102 Energy metabolism
00720 Other carbon fixation pathways
X636_06760
Enzymes [BR:
prb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
X636_06760
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
Citrate_bind
ATP-grasp
SAA
Motif
Other DBs
NCBI-ProteinID:
AHB75181
UniProt:
A0A378YKF1
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All DBs
Position
complement(4549554..4550720)
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AA seq
388 aa
AA seq
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MKIHEYQGKEILRKFGVAVPRGIPAFSVDEAVKAAEELGGPVWVVKAQIHAGGRGKGGGV
KVAKSIEQVREYAGQILGMQLVTHQTGPEGQKVNRLLIEEGADIKNELYVSLVVDRVTQK
IVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSVGLTDAQADDLAKKIGIPDASIPQARTI
LQGLYKAFWETDASLAEINPLNVSSNGTVTALDAKFNFDSNALYRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVTE
AFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMKGTNEDLGKKM
LAESGLPIISADSMEEAAQKVVAAAAGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcatgagtatcaaggcaaggaaatcctccggaaattcggagtcgcggtgccc
cgcggcattccggcgttttccgtggacgaggccgttaaggcagccgaagaactcggcggt
ccggtttgggtggtcaaggcccagattcacgcaggcggtcgcggcaagggcggcggcgtg
aaggttgccaagtcgatcgagcaagtgcgcgaatacgccggccagatcctcggcatgcaa
ctggtcacgcatcagaccggtccggaaggccagaaggtcaatcgcctgctgatcgaagaa
ggcgccgatatcaagaatgaactgtacgtcagcctggtggtcgaccgcgtcacgcagaag
atcgtgctgatgggttcgagcgaaggcggcatggacatcgaagaagtcgccgaaaagcac
ccggaactgatccacaaggtcatcgtcgagccgtcggtcggcctgaccgatgcccaggcc
gacgacctggccaagaagatcggcatccccgacgcttcgatcccgcaagcccgcacgatc
ctgcagggtctgtacaaggccttctgggaaacggacgcctcgctggccgaaatcaacccg
ctgaacgtgagcagcaacggcacggtcaccgcgctggacgccaagttcaacttcgactcg
aacgccctgtaccgtcacccggaaatcgtggcctaccgcgatctggatgaagaagatccg
gccgaagtcgaagcctcgaagttcgacctggcctacatctcgctcgacggcaacatcggc
tgcctggtgaacggcgccggcctggccatggccacgatggacaccatcaagctgttcggc
ggcgagccggcgaacttcctggacgtgggcggtggcgccacgacggagaaggtcaccgaa
gcgttcaagatcatgctgaagaacccgaacctgaccgccattctggtcaacatcttcggc
ggcatcatgcgttgcgatgtgatcgccgaaggcgtgatcgcagcctcgaaggccgtctcc
ctgaaggtgccgctggtcgtgcgcatgaagggcacgaacgaggacctgggcaagaagatg
ctcgccgaatccggcctgccgatcatttctgcggacagcatggaagaagctgcccagaag
gttgtcgcggccgccgcaggcaagtaa
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