Pandoraea pnomenusa: X636_08040
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Entry
X636_08040 CDS
T02950
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
prb
Pandoraea pnomenusa
Pathway
prb02020
Two-component system
prb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
X636_08040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X636_08040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
prb02022
]
X636_08040
Two-component system [BR:
prb02022
]
OmpR family
QseC-QseB (quorum sensing)
X636_08040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
OKR_DC_1_N
SCAR_helical
Motif
Other DBs
NCBI-ProteinID:
AHB75411
LinkDB
All DBs
Position
complement(4820874..4821584)
Genome browser
AA seq
236 aa
AA seq
DB search
MARRIAGALPTAGIDVTGVVCGEAMLTAHAEDRFDALVLDLDTTGAGGLGIIARLRTVEA
DVPVLLITSASAVEHRVAGLNAGADDYLVKPFDVRELAARLHALIRRTQGRCAHLIEAGP
LRLDPASGLAWLGQAPVALSRREIDLLACLASHRGRWVPPDTLHARLYGMTARVRSNVLN
VHIHNVRRKLGGSAIQTSRGLGYRLGWALAIPEPATGTDTSVRRFACASTRWPQSL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcgaatcgcgggcgccttgccgactgcgggcatcgacgtgacgggagtggtc
tgcggcgaggcgatgctcaccgcgcacgccgaagaccggttcgatgcgctggtgctggat
ctcgacacaaccggcgccggtggcctgggcatcattgcgcgtttgcgcaccgtggaagcg
gatgtgcccgtgttgctcatcacgtcggcaagcgcggtggagcacagggtggccgggctg
aatgcgggggccgacgactatctggtcaagcccttcgacgtgcgcgagctggccgcgcgg
ctgcacgcgctgattcgtcgcacgcagggtcgctgcgcgcacctgatcgaggcggggccg
ctacggctggatcccgcgagcgggctggcgtggctggggcaggcgcctgtcgccttgtcg
cgccgggagatcgacttgctggcgtgtctcgccagccatcgtggacgatgggtgccgccc
gacactttgcatgccaggctctacggcatgaccgcgcgagtgcgcagcaacgtgctcaac
gtccacatccacaacgtgcgtcgcaagctcggcggcagtgcgatccagacgtcgcgcggg
cttggctatcgcctggggtgggcgcttgcaataccggaacccgcaacgggcaccgacacg
tcggtcaggcggttcgcctgcgcttcgacgcggtggccgcagtcgctttga
DBGET
integrated database retrieval system
