Pandoraea pnomenusa: X636_08070
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Entry
X636_08070 CDS
T02950
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
X636_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_08070
Enzymes [BR:
prb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
X636_08070
DNA repair and recombination proteins [BR:
prb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
X636_08070
Prokaryotic type
X636_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHB75417
UniProt:
A0ABY6WIK7
LinkDB
All DBs
Position
4826380..4827408
Genome browser
AA seq
342 aa
AA seq
DB search
MASRSRATSSATSDARQRSLFDEPVPEAAGAAAASGASTTATTGMTDATHPTSTTTQPPA
EASAATAVRRRGRPPKSGAAVPRATKPAAPRAVAQDSHPEAAGPLKGRIEDQFDALPRDW
KTLVAPFVQSDAYASLCRFVDAEVAAGKTVYPADIFHALRMTSPRDVKVVILGQDPYHGD
DHGIAQAHGMAFSVQRGVRVPPSLRNMYKEIERDLGIVPPSHGNLDAWAKQGVLLLNTTL
TVEAGHAASHAKPFKTGGWQACTDTLLSGLATQPEPLVFMLWGSHAQAKAPLLAGHDHLL
LEAPHPSPLSAHRGFLGCGHFSAANAFLEQHGKTPIDWRLPD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgctcccgcgcgacctcctcggcaacgtccgacgcacgacaacgttcgctc
ttcgacgagccggttccggaggccgccggtgcggcggccgcttccggcgccagcaccacc
gccaccaccggcatgacggacgcgacgcacccgacttcgaccaccacgcaaccgccggcc
gaagcgagtgccgccactgcggtacgtcgtcgcggtcgtccgccgaagtcgggtgcggca
gtgccccgtgcgacgaaaccggcggcaccgcgcgccgtggcgcaagacagccatcccgag
gccgccgggccactgaaggggcgcatcgaggaccagttcgacgccctgccgcgcgactgg
aagacgctggtcgcgccgttcgtgcaaagcgacgcctatgcttccctgtgccggttcgtg
gatgcggaagtcgcggcgggcaagaccgtgtatcccgccgacatctttcacgcgttgcgc
atgacgtcgccccgcgacgtgaaggtcgtgatcctgggtcaggacccgtatcacggcgac
gatcacggcattgcccaggcgcacggcatggcgttttccgtgcaacgcggcgtgcgcgtg
ccgccgtcgctgcgcaacatgtacaaggaaatcgagcgggatctcggcatcgtgccccca
tcgcacggcaatctcgacgcgtgggcgaaacaaggcgtgctgctgctcaacacgaccctc
acggtggaagcgggccatgcggccagccacgcgaagccgttcaagaccggcggctggcag
gcgtgcaccgacacactgctgagcggactcgccacgcaaccggagccgctcgtcttcatg
ctctggggcagtcacgcgcaggccaaggcgccgctgctcgccggacacgaccacctgctg
ctggaagcaccgcacccgtccccgctttcggcgcaccggggctttctcggctgcggccat
ttcagcgccgccaacgccttcctcgaacaacacggcaagacgcccatcgactggcgcctg
cctgactga
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