Pandoraea pnomenusa: X636_08350
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Entry
X636_08350 CDS
T02950
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb03420
Nucleotide excision repair
prb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X636_08350
03430 Mismatch repair
X636_08350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_08350
Enzymes [BR:
prb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X636_08350
DNA repair and recombination proteins [BR:
prb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X636_08350
MMR (mismatch excision repair)
Other MMR factors
X636_08350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
DUF5710
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHB78436
LinkDB
All DBs
Position
4888062..4890197
Genome browser
AA seq
711 aa
AA seq
DB search
MPRFVPNGPALTDEQIAIALAGERICIAMANAGTGKTTTLVARIGEAIAGGTPPEQILAL
TFTTTAADVLRARLQRSGIHPELCKRVRVSTFDDYSHDVLDALPCANDRARRVQRDSFLT
GYLADAMQTLRDELGHRHPAGAFDDNHINVALCLEAMRKLKAGGALFDDVDEELLDERLF
QLDVTRAQYAVTQAYERERLGSRDEPLFRDRFDATYDLARLIDSDSVAPHYFAACRLIVC
DEQHDFNEASYRVLRHLLRTLNCRFVGVGDRDQVIHGAMGASDAYMGERFHADFSGTATY
PLTRTFRHGPHIAYPVGAFKRKAVESFVRRHTPVAVITTGSDADATARAVLADLREWLGD
SDRRATCAVLLRDWHQGAAIEQALWQADMPFESPNKEGFQFREEIRFVRAVFALTLRAHE
TIDERERMSVAAVLGIFANIRLTRDQYQLTAKHPELLEQIYTSYLLGAPQQTPAANIGRL
IRELRADAATLTAREAFRRIRQRVDFQSVATRLYARPYDVDLVERSLRAFASTLPQDDTP
LAAYFEAMMARLAGARQGRTQARISIDTVANVKGREFDHVVMPYLERNEFPNPFAPLESE
KNLFYVALTRARESISLITPADSTRQSGFIGLLDLARTTPRADDALLRNMAMPPDARPTR
RYLSGDTYGAKDELARLGAMYDAARRQLYITSDMDPTPFTQWLRTSNMGRE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgattcgtgcccaacggcccggcgctgaccgacgagcagatcgccatcgcgctg
gccggcgagcggatctgcatcgccatggccaatgcgggcacgggcaagacgaccacgctc
gtcgcacgcatcggcgaggccatcgccggtggcacgccgcccgagcagatcctcgcgctc
accttcacgaccacggcggccgacgtgctgcgcgcgcggttgcagcgcagcggcatccac
ccggagttgtgcaagcgcgtgcgcgtgtcgacgttcgacgattacagccacgacgtgctc
gacgccctgccctgcgccaacgaccgcgcccgccgggtgcaacgcgacagcttcctcacc
ggctacctcgccgacgcgatgcagacgctgcgcgacgaactggggcaccgccatccggcc
ggcgccttcgacgacaaccacatcaacgtggcgctgtgcctcgaggccatgcgcaagctc
aaggccggcggcgcactgttcgacgacgtggacgaggagttgctcgacgagcgtcttttc
cagctcgacgtcacacgagcgcaatacgccgtcacgcaagcctatgagcgcgagcgtcta
ggctctcgcgacgaaccgcttttccgcgaccgtttcgacgccacatacgatctggcccga
ctgatcgacagcgacagcgtggcgccgcattactttgccgcatgccgactgatcgtgtgc
gacgagcagcatgatttcaacgaagcctcgtatcgtgtgctgcgccatttgctgcgcacc
ctgaactgccgcttcgtcggcgtgggcgatcgcgatcaggtgattcacggcgccatgggg
gcgagcgacgcctatatgggcgagcgctttcacgcggacttctccggcaccgcgacctac
ccgctcacgcgcacgttccgtcacggaccgcacatcgcctacccggtgggcgccttcaaa
cgcaaggccgtcgaatcgttcgtgcgacgccacacgcccgtcgcggtcatcacgaccggc
agcgacgcagacgcgaccgcccgggcggtgcttgccgaccttcgcgaatggctgggtgac
agcgaccggcgcgccacgtgcgccgtgctgttgcgagactggcatcagggcgcggccatc
gagcaggccttgtggcaagcggacatgccgttcgaatcgccgaacaaggaaggattccag
ttccgcgaggagatccgcttcgttcgcgcggtattcgcgctgacgctgcgcgcgcacgag
accatcgacgaacgcgagcgcatgtcggtcgccgcggtgctcggcatcttcgcgaacatc
cgtctcacgcgcgatcagtaccagttgacggcaaaacaccccgaactgctcgaacagatc
tatacgtcgtatctgctgggcgcaccgcagcagacgccggcggccaacatcggacgcctg
attcgcgagctgcgcgccgacgccgccaccctcaccgcccgcgaagcgttccgacgcatc
cgtcaacgcgtcgacttccagtcggtcgccacacgcctgtacgcccggccctacgacgtc
gacctcgtcgagcggtcgctgcgcgccttcgcctcgacgctgccccaggacgacaccccg
ctcgccgcctatttcgaggcgatgatggcgcgcctggccggcgcgcgtcagggccgcact
caggcgcgcatcagcatcgacaccgtcgccaacgtcaagggccgggaattcgatcacgtc
gtcatgccctatctcgaacgcaatgagttcccgaacccgttcgcgccgctggagagcgag
aagaacctgttctacgtcgcgctcacccgcgccagagaatcgatatcgctcatcacgccc
gcggacagcacccggcagagcggcttcatcgggttgctcgatctggcgcgcaccacaccg
cgtgcggacgacgcgctcctgcgtaacatggcgatgccgcccgacgcccggccgacgcgg
cgctacctgagcggcgacacctatggcgcgaaagacgaactcgccagactcggcgccatg
tacgacgcggcacggcgccagttgtacatcacctcggatatggacccgacgcccttcaca
caatggcttcgcacgtcgaacatgggacgcgagtag
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integrated database retrieval system
