Pandoraea pnomenusa: X636_09270
Help
Entry
X636_09270 CDS
T02950
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
prb
Pandoraea pnomenusa
Pathway
prb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
X636_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prb03021
]
X636_09270
Transcription machinery [BR:
prb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X636_09270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_20
HTH_24
PhyR_sigma-like
HTH_23
GerE
HTH_IclR
Xre-like-HTH
HTH_11
MarR_2
HTH_Crp_2
HTH_10
HTH_28
HTH_40
MarR
HTH_5
TnsD
HTH_29
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AHB75617
LinkDB
All DBs
Position
complement(5080740..5081255)
Genome browser
AA seq
171 aa
AA seq
DB search
MPPDTTLTTLTTLRGLYNDHHGWLHGWLQRKTGCSHRAADLAHDTFVRMLERDPPRRLAS
PRAFITTVAQRVLYNFWRREQIERAYLDALAQQPESLVPSPEERAVVLETLLEIDRCLDG
LPPLVKRAFLLAQLDGLTQGEIADTLGISLATVKRHLVRAGTQCFFAMEAS
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ctgccgcccgataccacgcttaccacgcttaccacgcttcgcggcctctacaacgatcat
cacggctggctgcatggctggcttcagcgaaagaccggctgctcgcaccgcgcggccgac
cttgcgcacgacacgttcgtgcgtatgctggagcgcgatccgccgcgacggctggcgtcg
ccgcgcgcgttcatcacgaccgtagcccagcgggtgctttacaacttctggcgtcgcgag
cagatcgagcgcgcgtatctggacgcactggcacagcagcccgagtcgctcgtaccgtcg
cccgaggagcgcgccgtggtgctcgagacactcctcgagatcgatcggtgtctcgacggc
ctgccgcccctcgtcaaacgcgccttcctgctcgcccaactcgacggcctcacccagggg
gaaatcgccgacacactcggcatctcgctggcgacggtgaaacgtcatctggtgcgtgcc
ggcacacagtgcttcttcgcgatggaggcttcatga
DBGET
integrated database retrieval system