KEGG   Pandoraea pnomenusa: X636_10125
Entry
X636_10125        CDS       T02950                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
prb  Pandoraea pnomenusa
Pathway
prb02020  Two-component system
prb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    X636_10125
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    X636_10125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prb03021]
    X636_10125
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:prb02035]
    X636_10125
Transcription machinery [BR:prb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     X636_10125
Bacterial motility proteins [BR:prb02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    X636_10125
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122
Other DBs
NCBI-ProteinID: AHB75764
UniProt: A0A378YN68
LinkDB
Position
complement(5270855..5271583)
AA seq 242 aa
MYTARGKVDTNDTLTQYAPLVRRLALQLMAKLPASVELEDLIQAGMLGLLDAANRYQETQ
GAQFETYASQRIRGAMLDELRELDWASRGIRKTARQIEQAVQRLEQRLGRGPSESEIAGE
MSIGLSEYQQMLQDVHGCQLIYYEDFESADEEPFIDRICSDPGADPLTMLLDEGLRGGVV
DAIDRLPDREKLLMSLYYEQGLNLREIGAVLEVSESRVCQLHSQAISRLRATLREKAWTS
AS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtataccgcgcgcgggaaggtcgacacgaacgacacgctgacccaatacgcgccgttg
gtgcgccgtctggcgctgcaattgatggcgaagctgccggcgagcgtcgagctggaggat
ttgattcaggccggcatgctggggctgctcgatgcagcgaaccggtaccaggagacgcag
ggcgcgcagttcgagacgtacgcgagtcagcgcattcgtggcgcgatgctcgacgagttg
cgcgagctggactgggcgtcgcgcggtatccgcaagacagcgcgtcagatcgagcaggcg
gtgcagcggttggagcagcgtctgggccgggggccgtcggagagtgagattgcgggcgag
atgtccatcgggctgtccgagtatcagcagatgctgcaggacgtgcatggctgtcagctg
atctattacgaggacttcgaatcggcggatgaagagccgttcatcgaccgcatctgttcc
gatccgggcgcggatccgctgacgatgctgctcgacgagggccttcgcggcggggtggtc
gatgccatcgaccgattgcccgatcgcgagaagctgctgatgagcctgtattacgagcag
gggctgaacctgcgcgaaatcggtgcggtgctggaagtcagcgagtcacgtgtgtgccag
ttgcacagtcaggcgatttcgcgcttgcgggcgacgctgcgtgaaaaggcctggacgtcg
gcgagttga

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