Pandoraea pnomenusa: X636_11585
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Entry
X636_11585 CDS
T02950
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb00300
Lysine biosynthesis
prb00470
D-Amino acid metabolism
prb01100
Metabolic pathways
prb01110
Biosynthesis of secondary metabolites
prb01120
Microbial metabolism in diverse environments
prb01230
Biosynthesis of amino acids
Module
prb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X636_11585
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
X636_11585
Enzymes [BR:
prb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
X636_11585
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHB75998
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Position
226428..227279
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AA seq
283 aa
AA seq
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MKLKFTKMQGAGNDFVVIDGISQTIDFTPEQWRALADRHFGVGADQLLLVERSTLPGVDF
RYRIFNADGGEVEHCGNGARCFVKFVRDTGLTDKRSVRVEVQQGVITLTMREDGQVSVDM
GAPILTPSDVPFDTAGLQGRGEGDDTLWPLDVAGKTTWISVVSMGNPHAVQVVDNVDTAP
VETDGPLVERHARFPRRVNAGFLQVVGPHQARLRVYERGAGETLACGTGACAAAVAGIRR
GLLRAPVAIETHGGTLTIDWDGANGSVIMTGPAATVFEGTIEI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaattcaccaagatgcaaggtgccgggaacgactttgtcgtgatcgacggc
atctcgcagaccatcgatttcacgcccgaacagtggcgtgcgctcgccgaccgtcatttt
ggcgtcggcgccgatcagttgctgctcgtcgagcgctccacgctgccgggcgtggacttc
cgctaccgcatcttcaacgccgacggtggcgaggtcgagcattgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgacaccgggctgaccgacaagcgctcggtgcgcgtcgag
gtgcagcaaggcgtgatcacgctcacgatgcgcgaggacgggcaggtcagcgtggatatg
ggcgcgccgatcctcacgccgtcggacgtgccgttcgacaccgccggcctgcaagggcgt
ggcgagggtgacgacacgctctggccgctggacgtggctggcaagaccacgtggatttcc
gtggtgtcgatgggcaacccgcatgccgtgcaggtcgtggacaacgtcgacaccgcaccg
gtcgagacggacggtccgctcgtcgagcgacacgcccgtttcccgcgccgcgtgaacgcc
ggcttcctgcaggtggtcgggccgcaccaggcgcgactgcgcgtgtatgaacgcggtgcg
ggcgaaacgctcgcgtgcggcaccggcgcgtgtgccgcggcggtggcgggtatccgtcgc
gggctgctgcgcgcaccggtcgcgatcgagacgcacggcggcacgctcaccatcgactgg
gacggtgcgaacggctcagtcatcatgacggggccggccgccacggtcttcgagggcacg
atcgagatctga
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