Pandoraea pnomenusa: X636_12175
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Entry
X636_12175 CDS
T02950
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prb
Pandoraea pnomenusa
Pathway
prb03420
Nucleotide excision repair
prb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X636_12175
03430 Mismatch repair
X636_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_12175
Enzymes [BR:
prb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X636_12175
DNA repair and recombination proteins [BR:
prb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X636_12175
MMR (mismatch excision repair)
Other MMR factors
X636_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AHB76104
LinkDB
All DBs
Position
347441..349543
Genome browser
AA seq
700 aa
AA seq
DB search
MSSQPTEPTQRHVSAGDPWADLNDRQREAVDYGVGDDGSPGGPLLVIAGAGSGKTSTLAH
RVANLIVRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASSQPPSLPWAGTFHAVG
ARLLRDFAPRIGLSEAFTIHDRSDAEDLLGLVRHDLGFSATQSRFPLKGTCLSIYSRVVN
SQAPLAEVLAKYFPWCAQWEAQLKALFGAYVDAKQSQQVLDYDDLLLYWAETMGEPALAR
ELDARFDHVLVDEYQDTNRLQAQILLAMKPEGRGLTVVGDDAQSIYAFRAATIRNILDFP
GQFATPAHVVTLERNYRSTQPILDASNAVIAESSERYAKALWTDRQSTRLPQLVNVSDES
GQARWVADQVLAQRETGTRLMQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAH
VKDLLSILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMAQSATPAQVLAQFKPPSS
AAADWRAFVDVYMTLHDTRLAWPADVDLALRWYGPLLTQRFDDAAVRQADLEQLARIANT
YGSREQFLTELTLDPPDATSAQSGAPMLDEDYLILSTIHSAKGQEWHSVYVLNVVDGCIP
SDMSTGDDEDIEEERRLLYVAMTRARESLQLVVPQRFYVHQQTGLGDRHVYGTRSRFVPD
GMLPLYEIFPKPREDDAPRTPVGDVTVHIDVARKLRNAWS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcagccaaccgagccaacccagcgacacgttagcgctggcgatccctgggcc
gatctcaacgaccgacagcgcgaagccgtcgactacggtgtgggcgacgacggctcgccc
ggcgggccgctgctcgtcattgcgggtgcgggatcgggcaagacgagcacgctcgcgcat
cgcgtcgccaatctgatcgtgcgcggggcggatcccaaccgcatactgctgctgacgttc
tcgcgccgggccgccggggagatggagcggcgcgtcggcgcggtgctgcagaaggtgctg
ggactcgcgtcgtctcaaccgccgtcgctgccgtgggcgggaacgttccacgcggtgggc
gcccggctgctgcgcgatttcgcccctcgcatcggcctgtcggaggccttcacgattcac
gatcgcagcgatgccgaggacctgctcggtctcgttcgccacgacctcggcttttccgcc
acccagtcgcgcttccccctcaaaggcacgtgtctgtcgatctattcgcgcgtggtgaac
agtcaggcgccgcttgccgaggtgctcgcgaagtattttccgtggtgcgcgcaatgggag
gcgcaactcaaggcgctgttcggcgcctatgtcgacgccaagcagtcgcagcaggtgctc
gattacgacgacttgctgctttactgggccgagacgatgggcgagccggcactcgcgcgc
gagctcgatgcccgtttcgatcatgtgctcgtcgacgaataccaggacaccaaccggttg
caggcgcagattctgctcgcgatgaagcccgaggggcgtggcctgaccgtcgtcggtgac
gatgcgcagtcgatctacgcgtttcgcgcggccaccattcgcaacatcctcgacttcccc
gggcagttcgccacgcccgcgcacgtggtgacgctggagcgcaattaccggtcgacgcaa
ccgattctcgacgcgtccaatgccgtcatcgccgagtcgagcgagcgctatgcgaaggcg
ctgtggacggaccgccagtcgacgcggctgccgcagctcgtgaacgtgagcgacgaatcg
gggcaggcgcgatgggtcgccgatcaggtgctggcgcaacgcgagacgggcacacgcctg
atgcagcaagccgtgctgtttcgcaccggcagccacagcgccgcgctggagctggagctc
acgcgtcgcaatatccctttcgtgaaattcggcggactgaagtttctcgaggccgcgcac
gtcaaggacctgctgtcgatactgcgctgggcgcacaatccggcaagccgcttgtcgggc
ttccgcgtggcgcagttgatcccgggtatcggcccggtgagcgccacgcgtctgctcgac
gcgatggcccaatccgccacaccggcccaggtgctcgcgcagttcaagcccccgtcgtcg
gcggccgccgactggcgtgcgttcgtcgacgtctacatgacgctgcacgacacgcgtctg
gcatggccggccgacgtcgatctcgccctgcgctggtacggcccgctgctcacgcaacgg
ttcgacgacgccgccgtgcgtcaggccgatctcgaacagctcgcgcgcatcgccaatact
tacggctcgcgcgaacagttcctgaccgaactcaccctcgacccaccggatgccacgagc
gcgcaatcgggcgcgccgatgctcgacgaggattacctgatcctgtcgacgatccacagc
gcgaagggacaggagtggcattcggtctacgtgctcaacgtggtcgacgggtgcattccg
tccgacatgagcacgggagacgacgaggacatcgaggaagagcggcggttgctatacgtg
gcgatgacccgcgcgagggagtcgctgcaactggtcgtgccgcagcgcttttacgtgcat
cagcaaacgggactcggcgaccggcacgtctatggcacgcgaagccgtttcgtgccggac
ggcatgctgccgctgtacgaaatctttccgaagccgagagaggacgacgcgccccgcacg
ccggtgggcgacgtgacggttcacatcgatgtcgcgaggaaactgcgtaatgcctggtcc
tga
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