Pandoraea pnomenusa: X636_13495
Help
Entry
X636_13495 CDS
T02950
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
prb
Pandoraea pnomenusa
Pathway
prb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X636_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_13495
DNA repair and recombination proteins [BR:
prb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X636_13495
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X636_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_21
AAA_23
RsgA_GTPase
nSTAND3
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_25
Viral_helicase1
cobW
LNP1
Motif
Other DBs
NCBI-ProteinID:
AHB76337
UniProt:
A0A378YSS2
LinkDB
All DBs
Position
complement(609990..612854)
Genome browser
AA seq
954 aa
AA seq
DB search
METIRIRGARTHNLKNVNLDLPRHQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHGLPLESQSVSQMVDAVLALPEDTKLMILAPIVVDRKGEHADLFDSMQAQGFVRFRIR
SGGGAANEGTARVYDIDALPKLKKTEKHSIDVVIDRVKVRADLKQRLAESFETALRLADG
RAVALEMDTDKEHVFSSKFACPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQMTFFDPK
RVVAFPALSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDVDTPFEDLPEATQKIVLYGSG
EQEIPFTYVNEKGRTSVRSHAFEGIIPNLERRYRETDSVAVREELAKYQNNRACPDCEGS
RLRREARFVKVGEDKQARAIYEIGNLPLRDALGYFHELVLHGAKREIADKIVKEIVARLS
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMILASDYVVDMGLGAGIHGGKVIAQGSPAQIESAPESLT
GQYLSGARRIEVPAERHAPGEDHLRIVDATGNNLKHVNLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVARHLYGSSAEPAPYEQIDGLEHFDKVINVDQSPIGRTPRSNPATYTGVFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR
YNRETLEVQYKGRNISEVLDMTVEQAHEFFKPVPVVARKLRTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLTVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAANKASFTGKYLAPLLARAK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccattcgtattcgtggggcacgcacccacaacctcaagaacgtcaacctcgac
ctgccgcgccaccagctggtcgtgattaccggcctgtccggctccggcaagtcgtcgctc
gccttcgacacgctctacgcggaaggtcagcgccgctatgtcgagagcctgtcggcgtac
gcccgtcagttcctgcaactgatggaaaagccggacgtcgacctcatcgaaggcctgtcg
cccgcgatttccatcgaacagaaggccacgtcgcacaacccccgctcgacggtcggcacc
gtcacggaaatccacgattacctgcgcctgctctacgcccgcgtgggcacgccctactgc
cccgatcacggcctgccgctcgaatcgcaaagcgtctcgcagatggtcgatgccgtgctc
gcgctgcccgaagacaccaagctcatgatcctcgcgccgatcgtcgtcgatcgcaaagga
gaacatgcggacctgttcgattcgatgcaggcgcaaggcttcgtgcgctttcgcattcgt
tccggcggcggcgcggcgaatgaaggcaccgcacgcgtctacgacatcgacgcgctgccc
aagctcaagaagacggaaaagcattcgatcgacgtggtgatcgaccgcgtgaaggtgcgc
gccgatctcaagcaacgtctggcggagtcgttcgagacggcactgcgtctggccgacgga
cgcgccgtcgcgctcgagatggacaccgacaaggagcacgtcttcagctccaagttcgcc
tgcccggtgtgctcgtattcgctccaggagctcgagccacgcctgttctcgttcaacaac
ccgatgggcgcctgcccgacctgcgacggtctgggacagatgacgttcttcgacccgaag
cgtgtcgtggccttccccgcgctctcactcgcttccggcgcgatcaagggctgggatcgt
cgcaatcagttctacttccagatgctgcaaagcctggcggcgttctacgacttcgacgtc
gacacgccgttcgaggacttgcccgaggccacgcagaagatcgtgctgtacggctccggc
gagcaggagatcccgttcacctacgtgaacgagaagggccgcacgtcggtgcgctcgcat
gcgttcgaaggcatcatcccgaacctggagcgccgctatcgcgagaccgactcggtcgcc
gtgcgcgaggagctcgccaagtaccagaacaaccgggcctgccccgattgcgagggcagt
cgcctgcgccgcgaggcgcgcttcgtcaaggtcggcgaagacaagcaggcccgcgccatc
tacgagatcggcaacctgccgctgcgcgacgcgctgggctatttccacgaactggtgctg
catggggccaagcgcgagatcgccgacaagatcgtgaaggaaatcgtggcgcggctctcg
ttcctgaacaacgtcggcctggactacctgtcgctcgagcgcagcgccgacacgctctcg
ggcggcgaagcgcagcgcattcgtctcgcgtcgcagatcgggtccggtctcacgggcgtg
atgtacgtgctcgacgaaccctcgatcgggctgcaccagcgcgacaacgatcgcctcatc
ggcacgctcaagcacctgcgcgacctcggcaactcggtcatcgtggtggagcacgacgag
gacatgatcctcgcgagcgactatgtcgtcgacatgggactcggcgccggcattcacggc
gggaaagtgatcgcgcaaggcagccccgcgcagatcgaaagcgcgccggaatcgctcacc
gggcagtacctgtcgggcgcgcgccgcatcgaagtgccggccgagcgtcatgcccccggc
gaggaccacctgcgcatcgtcgacgccacggggaacaacctcaagcacgtcaacctcgat
ctgccggttggcctgctcacctgcgtgacgggcgtttccggatcgggcaagtcgacgctg
atcaacgatacgctgtaccacgccgtcgcgcgccatctctacgggtcgtcggccgagccg
gcaccgtacgaacagatcgacggactcgagcacttcgacaaggtcatcaacgtcgaccag
tccccgatcggccgcacgccgcgctcgaacccggccacgtacaccggcgttttcacgccg
attcgcgagctcttcgcgggcgtgcccgccgccaaggaacgcggttacgatcccggccgc
ttctcgttcaacgtgaagggcgggcgctgcgaggcctgtcagggcgacggcgtcatcaag
gtcgagatgcacttcctgccggatgtgtacgtgccctgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgaagtgcagtacaagggccgcaacatctcggaagtgctcgac
atgacggtcgagcaggcacacgagttcttcaagccggtgccggtcgtggcgcgcaagctc
aggacgctgctcgacgtgggcctgggctacatccgcctgggccagtcggccaccacgctc
tcgggcggcgaagcgcagcgcgtgaagctctcgctcgaactctccaagcgcgatacgggc
cgcacgctgtatatccttgacgaaccgaccaccgggctgcattttcacgatatcgaactg
ctcctcaccgtgattcatcggctgcgcgaccagggcaatacggtcgtcatcatcgagcac
aatctcgatgtgatcaaaacggcggactgggtgatcgatctcggaccggaaggcggtgcg
ggcggcgggcagatcatcgcgcagggcacgcccgaacaagtggcggccaacaaggccagt
ttcaccggaaagtaccttgccccgctgcttgcgcgcgcgaagtaa
DBGET
integrated database retrieval system