KEGG   Pandoraea pnomenusa: X636_13495
Entry
X636_13495        CDS       T02950                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
prb  Pandoraea pnomenusa
Pathway
prb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:prb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    X636_13495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prb03400]
    X636_13495
DNA repair and recombination proteins [BR:prb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     X636_13495
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      X636_13495
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_21 AAA_23 RsgA_GTPase nSTAND3 DnaJ_CXXCXGXG BCA_ABC_TP_C AAA_25 Viral_helicase1 cobW LNP1
Other DBs
NCBI-ProteinID: AHB76337
UniProt: A0A378YSS2
LinkDB
Position
complement(609990..612854)
AA seq 954 aa
METIRIRGARTHNLKNVNLDLPRHQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHGLPLESQSVSQMVDAVLALPEDTKLMILAPIVVDRKGEHADLFDSMQAQGFVRFRIR
SGGGAANEGTARVYDIDALPKLKKTEKHSIDVVIDRVKVRADLKQRLAESFETALRLADG
RAVALEMDTDKEHVFSSKFACPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQMTFFDPK
RVVAFPALSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDVDTPFEDLPEATQKIVLYGSG
EQEIPFTYVNEKGRTSVRSHAFEGIIPNLERRYRETDSVAVREELAKYQNNRACPDCEGS
RLRREARFVKVGEDKQARAIYEIGNLPLRDALGYFHELVLHGAKREIADKIVKEIVARLS
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMILASDYVVDMGLGAGIHGGKVIAQGSPAQIESAPESLT
GQYLSGARRIEVPAERHAPGEDHLRIVDATGNNLKHVNLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVARHLYGSSAEPAPYEQIDGLEHFDKVINVDQSPIGRTPRSNPATYTGVFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR
YNRETLEVQYKGRNISEVLDMTVEQAHEFFKPVPVVARKLRTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLTVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAANKASFTGKYLAPLLARAK
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggaaaccattcgtattcgtggggcacgcacccacaacctcaagaacgtcaacctcgac
ctgccgcgccaccagctggtcgtgattaccggcctgtccggctccggcaagtcgtcgctc
gccttcgacacgctctacgcggaaggtcagcgccgctatgtcgagagcctgtcggcgtac
gcccgtcagttcctgcaactgatggaaaagccggacgtcgacctcatcgaaggcctgtcg
cccgcgatttccatcgaacagaaggccacgtcgcacaacccccgctcgacggtcggcacc
gtcacggaaatccacgattacctgcgcctgctctacgcccgcgtgggcacgccctactgc
cccgatcacggcctgccgctcgaatcgcaaagcgtctcgcagatggtcgatgccgtgctc
gcgctgcccgaagacaccaagctcatgatcctcgcgccgatcgtcgtcgatcgcaaagga
gaacatgcggacctgttcgattcgatgcaggcgcaaggcttcgtgcgctttcgcattcgt
tccggcggcggcgcggcgaatgaaggcaccgcacgcgtctacgacatcgacgcgctgccc
aagctcaagaagacggaaaagcattcgatcgacgtggtgatcgaccgcgtgaaggtgcgc
gccgatctcaagcaacgtctggcggagtcgttcgagacggcactgcgtctggccgacgga
cgcgccgtcgcgctcgagatggacaccgacaaggagcacgtcttcagctccaagttcgcc
tgcccggtgtgctcgtattcgctccaggagctcgagccacgcctgttctcgttcaacaac
ccgatgggcgcctgcccgacctgcgacggtctgggacagatgacgttcttcgacccgaag
cgtgtcgtggccttccccgcgctctcactcgcttccggcgcgatcaagggctgggatcgt
cgcaatcagttctacttccagatgctgcaaagcctggcggcgttctacgacttcgacgtc
gacacgccgttcgaggacttgcccgaggccacgcagaagatcgtgctgtacggctccggc
gagcaggagatcccgttcacctacgtgaacgagaagggccgcacgtcggtgcgctcgcat
gcgttcgaaggcatcatcccgaacctggagcgccgctatcgcgagaccgactcggtcgcc
gtgcgcgaggagctcgccaagtaccagaacaaccgggcctgccccgattgcgagggcagt
cgcctgcgccgcgaggcgcgcttcgtcaaggtcggcgaagacaagcaggcccgcgccatc
tacgagatcggcaacctgccgctgcgcgacgcgctgggctatttccacgaactggtgctg
catggggccaagcgcgagatcgccgacaagatcgtgaaggaaatcgtggcgcggctctcg
ttcctgaacaacgtcggcctggactacctgtcgctcgagcgcagcgccgacacgctctcg
ggcggcgaagcgcagcgcattcgtctcgcgtcgcagatcgggtccggtctcacgggcgtg
atgtacgtgctcgacgaaccctcgatcgggctgcaccagcgcgacaacgatcgcctcatc
ggcacgctcaagcacctgcgcgacctcggcaactcggtcatcgtggtggagcacgacgag
gacatgatcctcgcgagcgactatgtcgtcgacatgggactcggcgccggcattcacggc
gggaaagtgatcgcgcaaggcagccccgcgcagatcgaaagcgcgccggaatcgctcacc
gggcagtacctgtcgggcgcgcgccgcatcgaagtgccggccgagcgtcatgcccccggc
gaggaccacctgcgcatcgtcgacgccacggggaacaacctcaagcacgtcaacctcgat
ctgccggttggcctgctcacctgcgtgacgggcgtttccggatcgggcaagtcgacgctg
atcaacgatacgctgtaccacgccgtcgcgcgccatctctacgggtcgtcggccgagccg
gcaccgtacgaacagatcgacggactcgagcacttcgacaaggtcatcaacgtcgaccag
tccccgatcggccgcacgccgcgctcgaacccggccacgtacaccggcgttttcacgccg
attcgcgagctcttcgcgggcgtgcccgccgccaaggaacgcggttacgatcccggccgc
ttctcgttcaacgtgaagggcgggcgctgcgaggcctgtcagggcgacggcgtcatcaag
gtcgagatgcacttcctgccggatgtgtacgtgccctgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgaagtgcagtacaagggccgcaacatctcggaagtgctcgac
atgacggtcgagcaggcacacgagttcttcaagccggtgccggtcgtggcgcgcaagctc
aggacgctgctcgacgtgggcctgggctacatccgcctgggccagtcggccaccacgctc
tcgggcggcgaagcgcagcgcgtgaagctctcgctcgaactctccaagcgcgatacgggc
cgcacgctgtatatccttgacgaaccgaccaccgggctgcattttcacgatatcgaactg
ctcctcaccgtgattcatcggctgcgcgaccagggcaatacggtcgtcatcatcgagcac
aatctcgatgtgatcaaaacggcggactgggtgatcgatctcggaccggaaggcggtgcg
ggcggcgggcagatcatcgcgcagggcacgcccgaacaagtggcggccaacaaggccagt
ttcaccggaaagtaccttgccccgctgcttgcgcgcgcgaagtaa

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