Pandoraea pnomenusa: X636_15420
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Entry
X636_15420 CDS
T02950
Symbol
dppD
Name
(GenBank) dipeptide ABC transporter ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
prb
Pandoraea pnomenusa
Pathway
prb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X636_15420 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prb02000
]
X636_15420 (dppD)
Transporters [BR:
prb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
X636_15420 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AHB76671
LinkDB
All DBs
Position
1041114..1042145
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AA seq
343 aa
AA seq
DB search
MTMPANAGPVLEVAGLSLKFSQAPDAPNLIDGVSFAVHPGKTLCIVGESGCGKSVTSLAL
MGLLPSPPANLVAGRAMFEGQDLLALRERDFADLRGNRLAMIFQEPMTSLNPAFTIGHQI
EEGIRRHRGLDRRAARAEALEMLKRVRIPAPETRLDNYPHELSGGMRQRVMIAMALANRP
ALLIADEPTTALDVTIQAQVLTLIQTLQRETGTAVVLITHDLGVVAEVADDVAVMYAGRI
VEYGTVDEIFDDPQHPYTIGLMGAIPSIGKREGTLATIRGAVPPPERMPAGCRFAPRCPF
AEARCTREAPVERTLSGSHRVACWLAPVEALTPPSTPMEEVVA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcccgccaacgccggaccggtgctcgaagtcgccggactgtcgctgaaattc
agccaggcgcccgacgcgcccaatttgatcgacggtgtttcgttcgccgtgcatcccggc
aagacgctgtgtatcgtcggtgaatcggggtgtggcaagagcgtgacgtcgctcgcgctc
atggggctgttgcccagcccgccggcgaacctggtggctggccgcgccatgttcgagggc
caggatctgctcgcgttgcgcgagcgcgactttgccgatctgcgcggcaatcgtctcgcg
atgatctttcaggagccgatgacctcgctcaatccggcgttcaccatcggtcatcagatc
gaagagggaattcgccgccatcgcggactggacaggcgtgccgcacgcgccgaggcgctc
gaaatgctcaagcgggtgcgcattcccgcgcccgagacacggctcgataactatccgcac
gaactctccggcggcatgcgccagcgcgtgatgatcgccatggcgctcgccaaccgtccg
gcgctgctcatcgccgacgagccgaccaccgcgctcgacgtgaccattcaggcgcaggtg
ctcacgctcatccagacattgcagcgcgaaaccgggactgccgtcgtgctgatcacgcac
gacctgggcgtggtcgcggaagtggccgacgacgtcgctgtcatgtacgccgggcgcatc
gtcgagtacggcacggtcgacgagatattcgacgacccgcagcatccttacacgattggg
ttgatgggggcgattccgtccatcggcaagcgggaaggcaccctggcgacgattcgcggg
gcggtgccgccccccgagcgcatgccggcgggctgccgtttcgcgccgcgctgcccgttt
gccgaagcgcgttgcacgcgcgaggcccccgtcgagcgtacgctgtcgggctcgcatcgg
gtggcgtgctggctcgcgcccgtcgaagcgctcacccccccgtccaccccgatggaagag
gttgttgcatga
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