Pandoraea pnomenusa: X636_16685
Help
Entry
X636_16685 CDS
T02950
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
prb
Pandoraea pnomenusa
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prb03032
]
X636_16685
03036 Chromosome and associated proteins [BR:
prb03036
]
X636_16685
03400 DNA repair and recombination proteins [BR:
prb03400
]
X636_16685
DNA replication proteins [BR:
prb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
X636_16685
Chromosome and associated proteins [BR:
prb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
X636_16685
DNA repair and recombination proteins [BR:
prb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
X636_16685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHB76902
UniProt:
A0A378YX78
LinkDB
All DBs
Position
1323944..1324237
Genome browser
AA seq
97 aa
AA seq
DB search
MTKSELVNQLAARFPQLVLKDADFAVKTILDAMADALARGHRIEIRGFGSFGLNRRPPRV
GRNPKSGEKVMVPEKFVPHFKPGKELRERVDHKASDQ
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattggtcaaccagttggcggcgcggtttccccagttggtgctcaag
gacgccgatttcgcggtgaagacgattctcgacgcgatggccgatgcgctcgcgcgcggt
catcgaatcgaaatccgcggattcggcagcttcgggctcaaccgtcggccaccgcgcgtc
ggccgcaacccgaagtcgggcgagaaggtgatggtgccggagaagttcgtgccgcacttc
aagcccggcaaggagttgcgagagcgggttgatcacaaggcgtcggaccaataa
DBGET
integrated database retrieval system
