Pandoraea pnomenusa: X636_20270
Help
Entry
X636_20270 CDS
T02950
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
prb
Pandoraea pnomenusa
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prb03009
]
X636_20270
Enzymes [BR:
prb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
X636_20270
Ribosome biogenesis [BR:
prb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X636_20270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_23
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
Methyltransf_15
Methyltr_RsmB-F
Methyltransf_32
MTS
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
AHB77521
LinkDB
All DBs
Position
2095052..2096503
Genome browser
AA seq
483 aa
AA seq
DB search
MEARGVGRTAPEGEPGTPDYKPGKVIFVEGALPGERVTYLSYRRKPKFEQAEAVSVLRSS
PMRAKPQCPHFGKCGGCSMQHLEPRAQIAIKQRVLEDNLARLGKVKAEAMLRPIQGPDWG
YRFRARLTVRYVPKKGGVLIGFHERKSSYVADMDSCEVLPRHVSDMLVPLRRLVESLSIR
ERLPQIELAIGADVTALVLRILEPLTPEDETILRAFADAHRVQFWVQPKGPDTAVPFYPL
EPELHYTLPEYQIRMPFKPTDFTQVNHQINRVLVHRALRLLAPESHERVLDLFCGLGNFT
LPLARRAGTVMGIEGSTALTERALANAQRNGVADRTEFACRNLFDITPDDIRALGAFDRY
LIDPPREGALAVAKALAELAQQGYDGLPRRIVYVSCSPATLARDAGLLVHEAGYRLTLAG
VVNMFPHTSHVESMAVFEHESIGQPWVPRVRVSEPQDEATPADEGVEAIAGAIGGDGVVH
ESE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcgcggcgttggccgcaccgcgccagagggtgagccgggtacccccgattac
aagcccggcaaggtcatcttcgtcgaaggcgcattgcccggcgaacgcgtcacctatctg
agctatcgccgcaagcccaagttcgagcaggccgaagccgtcagcgtgctgcgctcgagt
ccgatgcgcgcgaagccgcaatgcccccatttcggcaagtgtggcggctgctcgatgcag
cacctcgagccccgggcacagatcgccatcaagcagcgcgtgctcgaggacaatctcgcc
cggttggggaaagtgaaagccgaagccatgcttcgcccgattcagggcccggactggggg
taccgtttccgggcgcgtctgacggtgcgttacgtgccgaagaagggtggggtgctcatc
ggttttcacgaacgcaagagcagctacgtggccgacatggactcgtgcgaagtgttgccg
cgccatgtttccgacatgctcgtgcccttgcggcggttggtcgagtcgctctcgattcgc
gagcgtctgccgcagatcgagctggctatcggcgcggacgtgacagccctcgtgttgcgt
attctcgagccgcttacgccagaagacgaaaccattctgcgtgcgtttgccgacgcccat
cgtgtgcagttctgggttcagccgaaggggccggataccgcggtgccgttctatccgctc
gagccggagctgcattacacgctgccggaatatcagatccgcatgccgttcaagccgacg
gacttcacgcaggtcaatcaccagatcaatcgcgtactggtccatcgtgcgctgcggctg
ctggctcccgagtcgcatgagcgcgtgctcgacctgttctgcggcctgggtaacttcacg
ctgccgctggcgcgtcgcgccggcaccgtgatggggatcgagggcagcacggcgcttacg
gagcgggcgctggccaacgcccagcgcaatggtgtggcggatcgtaccgagttcgcgtgc
cgcaacctgttcgacatcacgcctgacgacattcgggcgctgggcgcgttcgatcgctac
ctgatcgacccgccgcgcgaaggggcgctggccgtcgcgaaggcgctcgccgagttggcg
caacagggctacgatgggctacccaggcgaatcgtttacgtgtcgtgcagtcctgcaacg
cttgcgcgagacgccggcctgctcgtgcacgaggcgggttaccgtctgacgctggcgggg
gtggtgaacatgttcccccatacgtcgcacgtcgaatcgatggcggtgttcgagcacgag
agtatcggtcagccctgggtgccgcgcgtgcgcgtgtcggagccgcaggacgaggcgacg
cccgccgatgagggggtcgaggcgatcgccggtgccatcggcggtgacggtgtggtccac
gaaagcgagtga
DBGET
integrated database retrieval system
