Pandoraea pnomenusa: X636_20320
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Entry
X636_20320 CDS
T02950
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
prb
Pandoraea pnomenusa
Pathway
prb02024
Quorum sensing
prb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X636_20320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X636_20320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prb03019
]
X636_20320
03036 Chromosome and associated proteins [BR:
prb03036
]
X636_20320
Messenger RNA biogenesis [BR:
prb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
X636_20320
Chromosome and associated proteins [BR:
prb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
X636_20320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AHB77531
UniProt:
A0A378YXP4
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All DBs
Position
2106931..2107167
Genome browser
AA seq
78 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPEAEQS
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaacttctacaagacccgtttctgaacgccttgcgtaaggagcat
gttcccgtctcgatctatctggtcaacggtatcaagctgcagggaaacatcgagtcgttc
gaccagtatgtcgtcctgctgcgcaacacggtcacccaaatggtgtacaagcacgccatt
tcgacggtcgtccctgcgcgtccggtgaatttccatccggaagccgagcagtcctga
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