KEGG   Pandoraea pnomenusa: X636_20320
Entry
X636_20320        CDS       T02950                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
prb  Pandoraea pnomenusa
Pathway
prb02024  Quorum sensing
prb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    X636_20320
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    X636_20320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prb03019]
    X636_20320
   03036 Chromosome and associated proteins [BR:prb03036]
    X636_20320
Messenger RNA biogenesis [BR:prb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     X636_20320
Chromosome and associated proteins [BR:prb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    X636_20320
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AHB77531
UniProt: A0A378YXP4
LinkDB
Position
2106931..2107167
AA seq 78 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPEAEQS
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaacttctacaagacccgtttctgaacgccttgcgtaaggagcat
gttcccgtctcgatctatctggtcaacggtatcaagctgcagggaaacatcgagtcgttc
gaccagtatgtcgtcctgctgcgcaacacggtcacccaaatggtgtacaagcacgccatt
tcgacggtcgtccctgcgcgtccggtgaatttccatccggaagccgagcagtcctga

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