Pandoraea pnomenusa: X636_21195
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Entry
X636_21195 CDS
T02950
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
prb
Pandoraea pnomenusa
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prb03009
]
X636_21195
Enzymes [BR:
prb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
X636_21195
Ribosome biogenesis [BR:
prb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
X636_21195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHB77655
LinkDB
All DBs
Position
complement(2255766..2256485)
Genome browser
AA seq
239 aa
AA seq
DB search
MELDRLLQSQGFGSRKMCRKLIATGAFAIDGVVHDNPRESIDPSGLRFTLDGEPWEYREH
VYVLLNKPAGYECSTSPTHHEGVHSLLPLPLAVRGVQPAGRLDQDTTGMLLLSDDGPFLH
AMMSPRRHVPKRYVATTKHPVTEDMLKALREGVLLRDETEPLAATDVMSPSLHEIALTIT
QGKYHQVKRMVAAAGNRVEGLVRTAIGGLPMGTLGPGEWRYLSPEELLSLPYDIPASGK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atcgagctagatcgcttattgcaatcgcagggcttcggcagtcgcaagatgtgccgcaag
ctcatcgcgaccggcgcattcgccattgacggcgtggtccatgacaacccgcgcgagtcc
attgacccgtcggggcttcggttcacgctggacggcgagccatgggagtaccgcgagcac
gtctacgtgctgctgaacaagcctgccggctacgaatgctccacgagccccacgcatcat
gagggcgtgcattcgctcctgcctctaccgctcgccgtgcgcggtgtgcaaccggccgga
cgcctcgatcaggacaccaccggcatgctgctgctgtccgacgacggcccgttccttcac
gcaatgatgtcgccgcggcggcacgtgcccaagcgttacgtggccaccacgaagcatccg
gtcacggaagacatgctcaaggcattgcgcgaaggcgtactgctgcgcgacgagacggaa
ccgctcgcggccacggacgtcatgagtccttcgctgcatgagatcgccctgacgatcacc
caaggcaaatatcatcaagtcaaacggatggtcgccgcggcgggcaaccgtgtggagggt
ctggtcagaacggcgatcggcggcctgccaatgggcacgctcgggccgggcgaatggcgc
tacttgtcgccggaagagttgctgtccctgccctacgacattcccgcatcgggaaaatga
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integrated database retrieval system
