Pandoraea pnomenusa: X636_21365
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Entry
X636_21365 CDS
T02950
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prb
Pandoraea pnomenusa
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prb03016
]
X636_21365
Enzymes [BR:
prb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
X636_21365
Transfer RNA biogenesis [BR:
prb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
X636_21365
Prokaryotic type
X636_21365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
CT_A_B
Motif
Other DBs
NCBI-ProteinID:
AHB77684
LinkDB
All DBs
Position
2300774..2301766
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AA seq
330 aa
AA seq
DB search
MTDPRSQAPRQKLPRFALDGVLLLDKPLGLSSNDALIKAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEAHVRLGETTTTGDAEGEVLQTRPVTVDDAAIRAILP
RFMGRISQIPPMYSALKRDGKPLYEYARAGQTLEREAREVTVHALALTQSALPHTNEFTF
RVTCSKGTYVRTLAEDIGEALGCGAHLRGLRRTAVGPLTLDGAVTLEDLSALDHAQRVAK
LAPVDALLKTLPAIMLDETLARRFSHGQRLRLDEIRCPTPLRAYAAAHGEIEVKVYTEAT
SEATSRLLGVARLDGEALLTPQRLLKTQSS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaagctcccccgtttcgcactcgatggc
gtgttgttgctggacaagccgctcggcctgtcatccaacgatgccctgatcaaggccaag
cgtttgcttcaggcgctcaaggcaggccacacgggcacgctcgatcccttggcgaccggg
ttgctgccgctgtgtttcggcgaggcgacgaagttctcgcaggacttgctcgaggccgac
aagacctacgaagcgcacgtgcgcctgggcgagacgaccacgacgggcgacgccgaaggc
gaggtgttgcaaacgcggccggtgacggtggacgatgcggcgatccgtgccatattgcct
cgtttcatggggaggatttcgcaaatcccgccgatgtactcggcgctcaagcgcgacggc
aaaccgttgtacgaatatgcgcgcgcgggccaaacgctcgaacgtgaggcgcgcgaggtc
accgtccatgcactggcgctgacgcaaagcgcactgccgcacacgaacgaattcacgttc
cgtgtgacgtgcagtaaaggcacatacgtgcgcacgcttgcggaagacatcggggaagcg
ttggggtgcggtgctcacctgcgcggtttgcgccgcacggcggtgggaccgctgacactc
gacggcgccgtcacgctcgaagacctgagcgcgctggatcatgcgcaacgcgtggcgaag
ctcgcaccggtcgatgcattgctcaagacgctgcccgcgatcatgctcgacgaaacgctg
gcgcgacgcttcagtcacggtcagcgtctgcgactcgacgagatccgctgtccgacgcca
ttgcgtgcttacgcagccgcgcacggcgagatcgaagtcaaggtctacacggaggccacg
agcgaagccacttcgcgcttgctgggggtcgcgcgactcgatggcgaagcgttgctcaca
ccgcagcgactgctcaagacacagtcatcgtga
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