Prochlorococcus sp. MIT 0604: EW14_0375
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Entry
EW14_0375 CDS
T03304
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
prc
Prochlorococcus sp. MIT 0604
Pathway
prc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EW14_0375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prc03400
]
EW14_0375
Enzymes [BR:
prc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EW14_0375
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EW14_0375
DNA repair and recombination proteins [BR:
prc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EW14_0375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AIQ94399
UniProt:
A0A089QII5
LinkDB
All DBs
Position
complement(344682..345563)
Genome browser
AA seq
293 aa
AA seq
DB search
MPELPEVETVRRGLEQKLNNFIIKKVEVCRDSTVAFPANKEVFIKGLKSSLLYKWNRRGK
YLIAELKKIENEKIQINEKVSLKHNGFLVVHLRMTGYFKYINKPTPPCKHTRIRFLDKNN
KELRYIDVRSFGQMWWIKQGLSPNKIIRGLGSLGPEPFSENFDAKYLRKVISKRTKSIKA
ILLDQTIVAGIGNIYADESLYSAGISPFREAQTIKKNELIKLKESIVTVLKKSIGSGGTT
FSDFRDLEGENGNFGLQTNVYRRTGKECHKCGNLIKRQKIAGRSTHWCPKCQK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagttacctgaagtagaaactgttcgaagaggtttagagcaaaaacttaataac
tttattattaaaaaagtagaagtttgtagggattcaactgtagcattccctgccaacaaa
gaagtatttattaaggggcttaagagctcgcttttatacaaatggaacaggagaggaaaa
tatttaatagctgaactaaaaaaaattgaaaatgagaaaattcaaattaatgaaaaagta
tcattaaaacataatggatttcttgtcgttcatttaagaatgactggatatttcaagtat
attaataaacctaccccgccctgtaaacatacaagaataagatttttagataaaaataat
aaagagcttagatacattgatgtaagaagttttggccaaatgtggtggattaagcaaggg
ttatcgcccaataaaataatcagaggattaggctcattaggaccagaaccattttctgaa
aactttgatgcaaaataccttaggaaagttatttcaaaaagaacaaaatctataaaagct
attttattagatcaaacaatagtggctggtataggcaatatttatgctgatgaaagttta
tactcggctggcatctcaccttttagggaagctcaaacaataaagaagaatgagttaata
aagctcaaagaatcaattgtaactgtattaaaaaaaagtataggttctggtgggacaaca
tttagtgacttcagagacttggagggagagaatgggaattttggtttacagacaaatgtc
tatagaagaactggtaaagaatgtcataaatgtggaaatttaataaaaaggcaaaaaatt
gctggaagaagtactcattggtgtcctaaatgccaaaaataa
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