Prochlorococcus sp. MIT 0604: EW14_1893
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Entry
EW14_1893 CDS
T03304
Name
(GenBank) DNA-directed RNA polymerasee alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prc
Prochlorococcus sp. MIT 0604
Pathway
prc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EW14_1893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prc03021
]
EW14_1893
03400 DNA repair and recombination proteins [BR:
prc03400
]
EW14_1893
Enzymes [BR:
prc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EW14_1893
Transcription machinery [BR:
prc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EW14_1893
DNA repair and recombination proteins [BR:
prc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EW14_1893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
DUF2476
Motif
Other DBs
NCBI-ProteinID:
AIQ95900
UniProt:
A0A089PAT4
LinkDB
All DBs
Position
complement(1586461..1587396)
Genome browser
AA seq
311 aa
AA seq
DB search
MQYQIDRIDHQIADDRSQTGTFLIGPLERGQATTLGNSLRRVLMGGLEGSAVTAVRIAGI
NHEYATIPGVREDVLDILLNCKQLSINSSNPELEIGRLVASGPMEVKANDIQFSSQVEIV
DGEKPIATIQEGHNLELEIHVERGVGYRPVDRKSEETTAIDLLQIDAVFMPVKRVNFTID
ETAVAEGATGRERLKMEVVTDGSTSPDDAIAEAANQLIELFQPLATVTMVEEIPEEPEPS
PEAQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALERI
GISIPQSRTSV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgcaataccagattgacagaatcgaccatcaaatagcagatgatcgctcccaaacagga
acttttttaattggccctctagaaaggggacaagctacaactttgggtaattctcttaga
agagtccttatgggaggacttgaagggagtgcggttactgcagtaagaatagcaggaatt
aatcatgaatatgccactattcctggagttagagaagacgttttagatatccttctcaat
tgtaagcaactatcaataaatagttctaatccagagctcgaaatcggtagattagtagca
agcggtccaatggaggtgaaggcgaatgacattcaattctcctctcaagttgaaattgtg
gatggagaaaaaccgattgcgactattcaggagggtcataacttagagttggaaatccac
gttgaaagaggtgttggatatagacccgttgaccgtaagagcgaagagacaacagctatt
gacttacttcaaatagatgctgtatttatgccagttaagagagtgaattttacaattgat
gaaactgctgtagcagaaggtgcaacaggaagagaaagattaaaaatggaagtagtgaca
gatggctcaacaagtcctgatgatgctattgctgaagctgcaaatcaattaatagaactc
ttccaacccctcgctactgtcacaatggttgaggaaattcctgaagaacctgaaccatct
cctgaagctcaaattcctctagaggaactaaacttgtccgttagagcatataattgtttg
aaaagggcgcaagttaactcagtttcggatttaatgggcttcagttatgaagatcttctt
gaaattaagaactttggctctaaatctgcagatgaggttattgaggctctagagcgaatc
ggcatttctatcccacaaagcagaacatctgtttaa
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