Pradoshia sp. D12: F7984_00105
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Entry
F7984_00105 CDS
T06218
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
prd
Pradoshia sp. D12
Pathway
prd03030
DNA replication
prd03430
Mismatch repair
prd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F7984_00105 (dnaX)
03430 Mismatch repair
F7984_00105 (dnaX)
03440 Homologous recombination
F7984_00105 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prd03032
]
F7984_00105 (dnaX)
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_00105 (dnaX)
Enzymes [BR:
prd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F7984_00105 (dnaX)
DNA replication proteins [BR:
prd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F7984_00105 (dnaX)
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F7984_00105 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
AAA_5
AAA_22
TIP49
AAA_16
AAA_19
AAA_7
AAA_2
DnaX_C
PIF1
Rad17
AAA_assoc_2
nSTAND3
Mg_chelatase
AAA_28
AAA_18
AAA_14
DNA_pol3_delta_C
RNA_helicase
DUF815
TsaE
INTS7_HB
NBP1
Motif
Other DBs
NCBI-ProteinID:
QFK69813
LinkDB
All DBs
Position
23471..25159
Genome browser
AA seq
562 aa
AA seq
DB search
MGYQALYRVWRPQAFEDVIGQEHVTKTLQNALLHQKISHAYLFSGPRGTGKTSAAKILAK
AVNCEHAPVQEPCNECASCRGITDGSISDVLEIDAASNNGVEEIRDIRDKVKYAPSSVKY
KVYIIDEVHMLSTGAFNALLKTLEEPPAHVIFILATTEPHKIPLTIISRCQRFDFKRITP
QDIVGRMERILTETGISYDQNALLVIARAAEGGMRDALSLLDQSISFGSDNITLEDALTV
TGAVSQSFLTKIVSAIYKRETAEALNQLQELLALGKDPIRFVEDMILYFRDMLLFQAAPE
LEDSMERVYIDQDFKELAENISSDQLHFWIDQWNRSIQEMKWSSHPRIFLEVLLVKLCQS
EPESSKSSVTDDTIQKLMNKINQLETQLNTIRENGVAINKDSAPAKEKAKVTTNRSFKVP
VGRVNDILKRATKPDLLKIKSNWGGMLESLKKSQAALLNDAEPVAASNDAFVLKFKYEIH
CQMAMNNQEFISGLKGTLQQVTGNLYDIVGIPEESWHKIRQEFVSTQKQDQPESQETNEE
TEDPLIFKARELFGDELLEIKD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttgggttatcaagcattataccgagtttggcgtcctcaggcttttgaagatgtgatcggt
caggaacatgttactaaaacgctccaaaatgccctgctgcaccaaaaaatatcccatgct
taccttttttcaggtccacgtgggacaggtaaaacaagtgcagcgaaaatattagcgaaa
gcagttaactgtgagcatgccccagttcaggagccatgtaatgaatgtgcatcatgcagg
ggtataacagatggttcgatctctgatgtattagaaattgacgcagcctccaataatgga
gttgaagaaattagagatatacgtgataaggtaaaatatgcgccttcatcggttaagtac
aaagtgtatatcattgatgaagtccatatgttgtcaactggggccttcaacgctttactg
aaaacacttgaagaaccaccggctcatgttatattcattttagctactaccgagccacat
aaaattcctctcactattatttcaagatgtcaacgcttcgatttcaaacgcatcactcca
caggatattgtcggaaggatggaaagaatcttaactgaaaccggcatttcatacgatcag
aatgcattattggttatcgcaagagcggcagaaggcggtatgagggatgccttgagtttg
ctggaccagtccatatcatttggttccgacaacattacattagaggatgcactgaccgtt
actggagctgtttcacaatcctttttaactaagattgtaagtgcaatctataagagagag
acggccgaagcattaaatcaactccaggaattactagctttagggaaagatccaattcgt
tttgttgaagatatgattctgtattttcgggacatgctcctatttcaggcggcaccagag
ctcgaggattcaatggaaagagtttatatagatcaagattttaaagaacttgctgaaaac
atttcgtcagatcaacttcatttttggattgatcaatggaatcgttctattcaggaaatg
aagtggtccagtcaccctagaatatttttggaggttttgttggtaaagctttgccaaagt
gaaccggaaagcagcaagagttcagttacagacgacacgattcaaaaactaatgaataaa
atcaatcaactggaaactcagttaaacaccatacgtgaaaatggagttgcgattaataaa
gactcagctcctgctaaagaaaaggctaaagtaacaacaaaccgatcctttaaagtgccg
gtaggacgagttaacgatatattaaaaagagcaaccaagcccgatttattaaagataaaa
agcaattggggtggaatgcttgaatcgctgaaaaaatcacaggcggcattattaaatgat
gcagaacctgtagctgcctctaatgatgcttttgtgttaaaattcaaatatgaaattcat
tgccaaatggctatgaataatcaggagttcatcagtggtttaaagggtacactacagcaa
gtgacaggcaatctatacgatattgttggcattccggaagaaagctggcataaaattcgc
caggagtttgtttctactcaaaaacaagaccaaccggaatctcaagagacaaatgaggaa
acagaagatccgctgatttttaaagcaagagaacttttcggcgatgaacttttagaaata
aaagattaa
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