Pradoshia sp. D12: F7984_01440
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Entry
F7984_01440 CDS
T06218
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
prd
Pradoshia sp. D12
Pathway
prd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7984_01440 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prd03019
]
F7984_01440 (groL)
03110 Chaperones and folding catalysts [BR:
prd03110
]
F7984_01440 (groL)
03029 Mitochondrial biogenesis [BR:
prd03029
]
F7984_01440 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prd04147
]
F7984_01440 (groL)
Enzymes [BR:
prd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
F7984_01440 (groL)
Messenger RNA biogenesis [BR:
prd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
F7984_01440 (groL)
Chaperones and folding catalysts [BR:
prd03110
]
Heat shock proteins
HSP60 / Chaperonin
F7984_01440 (groL)
Mitochondrial biogenesis [BR:
prd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
F7984_01440 (groL)
Exosome [BR:
prd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
F7984_01440 (groL)
Exosomal proteins of other body fluids (saliva and urine)
F7984_01440 (groL)
Exosomal proteins of breast cancer cells
F7984_01440 (groL)
Exosomal proteins of colorectal cancer cells
F7984_01440 (groL)
Exosomal proteins of bladder cancer cells
F7984_01440 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QFK70020
UniProt:
A0A5J6XK23
LinkDB
All DBs
Position
251830..253464
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AA seq
544 aa
AA seq
DB search
MAKDIKFSEEARRAMLRGVDALADTVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPMGVRKGIE
KAVSVAIEELQAISKPIEGKESIAQVAAISSADEEVGALIAEAMERVGNDGVITIEESKG
FTTELDVVEGMQFDRGYSSPYMVTDSDKMEAVLENPYILITDKKISNIQEVLPVLEQVVQ
QGKPLLLIAEDVEGEAQATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAALTGGEVIT
EELGRDLKSATLTSLGRAAKVVVTKETTTIVEGAGETSEIGARINQIRSQLEETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVSV
YNKVAAVELEGDAQTGVNIVLRALEEPVRQIAHNAGLEGSVVVERLKKEEIGIGFNAANG
QWVNMIESGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEPAGAGGGMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaatttagtgaagaagctcgccgcgctatgttacgtggggtagat
gcattagctgatacagtaaaagttacacttggaccaaaaggacgtaacgttgttcttgaa
aagaaattcggttccccacttatcacaaatgatggtgtaacaatcgcaaaagaaatcgag
cttgaagacgcgtttgaaaacatgggtgctaaattggttgcagaagtagcaagcaaaaca
aatgaaattgctggtgacggtacaactactgcaacagttcttgcccaagctatgattcgt
gaaggattgaaaaacgtaacagctggcgctaacccaatgggcgttcgtaaagggattgaa
aaagctgtttctgttgcaattgaagaattacaagcaatctccaaaccaatcgaaggcaaa
gaatccattgcacaagttgctgcgatttcttctgctgacgaagaagttggcgctctaatt
gctgaagcaatggaacgcgttggtaacgacggagttatcacaatcgaagaatccaaagga
tttacaactgaactagatgtagtagaaggtatgcaattcgaccgtggatattcttctcca
tacatggtaacagattccgataaaatggaagctgtactagaaaatccatacatcttgatc
acagataagaaaatctctaacatccaggaagtacttcctgtccttgaacaagttgttcaa
caaggtaaacctttattgctaattgctgaggatgttgaaggtgaagcacaagcaactcta
gttgtgaacaaacttcgcggaacattcaatgcagtagctgttaaagctcctggattcggt
gaccgtcgtaaagctatgcttgaagacatcgctgcattaactggcggtgaagtaatcact
gaagaactaggccgtgaccttaaatctgctacattaacttctcttggacgcgctgcgaaa
gttgttgttacaaaagaaacaactacaatcgttgaaggtgctggagaaactagcgaaatc
ggtgcacgtatcaatcaaattcgttcccaattagaagaaactacttctgaatttgataaa
gaaaaattacaagagcgtcttgctaaacttgctggcggcgtagccgttatcaaagtaggt
gcagcaactgaaacagaattgaaagagcgcaaacttcgcattgaagatgctctaaactcc
actcgtgctgctgttgaagaaggtatcgtagccggtggtggtactgcacttgtaagtgtg
tacaataaagtggctgctgtggaacttgaaggcgatgcacaaactggtgttaacatcgta
cttcgtgctcttgaagagccagttcgccaaatcgctcacaacgcaggccttgaaggttct
gtagttgtagaacgtcttaaaaaagaagaaatcggcattggcttcaatgcagctaatggc
caatgggtaaacatgatcgaatccggtatcgtggatcctactaaagtaactcgttctgca
cttcaaaacgcagcttctgttgcagctatgttcttaacaactgaagcagttgttgctgac
aagccagagccagctggtgcaggcggcggaatgcctgacatgggtggtatgggcggaatg
ggcggcatgatgtaa
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