Pradoshia sp. D12: F7984_01920
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Entry
F7984_01920 CDS
T06218
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prd
Pradoshia sp. D12
Pathway
prd03420
Nucleotide excision repair
prd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7984_01920 (pcrA)
03430 Mismatch repair
F7984_01920 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_01920 (pcrA)
Enzymes [BR:
prd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7984_01920 (pcrA)
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7984_01920 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
F7984_01920 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ASXH
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QFK70102
UniProt:
A0A5J6XIK7
LinkDB
All DBs
Position
364708..366981
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AA seq
757 aa
AA seq
DB search
MQFLTDRLLTGLNNKQKEAVQATDGPLLIMAGAGSGKTKVLTHRIAFLIVEKEVAPWNIL
AITFTNKAAREMKERIQGILGGAAEDIWISTFHSMCVRILRRDIDRIGMNRNFSILDPGD
QQTVIKQIMKEKNIDTKKFDPKTILGSISSAKNELINYEEFANSAGNYYEQTVADLYTEY
QKRLRKNQALDFDDLIMKTFELFDKVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKKLA
QRFKNLCVVGDSDQSIYRWRGADIANILSFEKDYPDANVILLEQNYRSSKRILAAANGVI
NNNLNRKEKNLWTENLEGNKLAYYRADSEQGEAQFVAGKIKELTEQQGKKLSDIAILYRT
NAQSRVMEEVLLKSNIPYTIVGGIKFYDRKEIKDILAYLRLIANPDDDISLRRVINVPKR
GVGASSVDKIANYAADHDISMYQAMMELEFIGLSGKAYNGAAEFRDLIKNYTQMQEFLSV
TELIEEVIEKSGYRKSLEIEKTIEAETRLENIDEFLSVTKNFEKGSDDKSLVAFLTDLAL
VADIDRMDEDEAVTDGVVLMTLHSAKGLEFPAVFLIGLEEGVFPHSRALMEEAEMEEERR
LAYVGITRAERELFITNAQMRTLYGRTNLNPVSRFIKEIPQDLIELLNPPEEQRQSRPSF
MHSGSGTRTRTGINGAGLNNSGINGAARPKTVGRSMMNESGGEKLDWQVGDKAAHGKWGV
GTVVSVKGSGDGLELDIAFPSMGIKRLLAKFAPITKQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcttaacagatcgactgttaacgggattaaataataaacaaaaagaggctgta
caagctacggatggacctttgctaattatggccggagcgggcagtgggaagacaaaggta
cttacccaccgcattgcctttctaattgtagaaaaagaagtagcaccgtggaatattctt
gccattacgtttaccaataaggcagcaagagaaatgaaggaaagaattcagggaatccta
ggcggcgctgcagaggatatttggatttctactttccactcaatgtgcgtgcgaatcctg
cgccgtgatattgaccgaattggtatgaatcgcaatttctcaattcttgacccaggtgat
cagcaaacggttattaagcaaataatgaaagagaagaatattgatacgaagaaattcgat
cctaagacgattcttggttccatttcctctgccaaaaatgaattgatcaactatgaggaa
tttgcgaacagtgcaggcaattactatgagcaaacagtagctgatctttatacagagtat
cagaagcgactccgtaaaaatcaggcattggactttgatgatttgattatgaagacattt
gaactttttgataaggttccggaagtactggaattctatcaaagaaagtttcaatatatt
cacgtggatgagtatcaggatacgaaccgtgcacaatatatgcttgtaaagaaattggca
cagcgttttaaaaacctatgtgtagttggtgattccgatcagtccatctatcgctggcgt
ggtgctgatattgccaacattctctcctttgaaaaggattatcctgatgccaatgttatt
ttgcttgagcagaattatcgctcctcaaaacggattttagcggctgccaatggagtaatt
aacaacaacctgaatcgtaaggaaaagaatttgtggacagaaaacctggaagggaataag
ttggcatattaccgtgcggacagtgaacaaggtgaagcacagttcgttgctggaaagatt
aaagagctgacagaacagcaagggaagaagctatctgatattgccattttgtaccgtacg
aatgctcagtcaagggtaatggaggaagttctgcttaaatccaatattccatatacgatt
gttggcggtattaagttctatgatcgtaaagagattaaagatattcttgcttatctgcga
ctcattgccaatccggacgatgatattagcttgcgcagggtcatcaatgttccaaagcgt
ggagttggagcaagctcagttgataaaattgctaattatgctgccgatcatgatatttct
atgtatcaggctatgatggagcttgaatttattggacttagcggtaaagcttataatggg
gctgctgaattcagggacctaattaaaaactatacgcaaatgcaggaattcctgtctgtt
acagaattaatagaagaagtcattgaaaaatcagggtatcgaaagtcgttggaaattgag
aagacgattgaagcagaaacacgcctagagaatattgatgagttcttatctgttacgaaa
aactttgaaaagggcagtgatgataagagcctggttgccttcttaacagaccttgctctt
gttgcggacattgaccgtatggatgaggatgaagccgtgacagatggcgttgtattaatg
acacttcactcggcaaaagggctggaattccctgctgtattcctgattggacttgaagaa
ggtgtcttcccgcatagccgtgccttaatggaagaagcggaaatggaagaagaacgacgg
cttgcttatgttgggatcacacgggctgaacgtgaattatttattacgaatgcacagatg
cgtacattatatggacgtactaatctgaaccctgtatctcgctttattaaagaaattcca
caggatttaattgaactgttaaatccgcctgaagagcaaaggcagtcaagaccttccttt
atgcattcaggttcaggtacaagaactagaacgggtataaatggtgccggtcttaacaat
tcaggaatcaatggtgcagcaagacctaaaactgtcggaagatcgatgatgaatgagtcc
ggcggagaaaaactcgactggcaggttggcgataaagcggcccatggtaaatggggcgta
ggtacagttgtcagcgtaaaaggaagcggagacggtctggagctggatattgcattccca
tctatgggtatcaaacgactccttgccaaatttgcaccaatcacaaaacaatag
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