Pradoshia sp. D12: F7984_06550
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Entry
F7984_06550 CDS
T06218
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
prd
Pradoshia sp. D12
Pathway
prd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F7984_06550 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_06550 (priA)
Enzymes [BR:
prd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7984_06550 (priA)
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F7984_06550 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
ATPase_2
Zn_ribbon_6
PIF1
ADDB_N
TrwB_AAD_bind
Cas3-like_C_2
WHD_PriA_bact
AAA_16
RUBY_RBDX
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-ProteinID:
QFK70928
LinkDB
All DBs
Position
1328780..1331194
Genome browser
AA seq
804 aa
AA seq
DB search
MIAEVIVDVPAQQTDRPFDYKIPEKWAGIIREGMRVTVPFGPRKLLGFVVRIKEHTEVKG
LKSISSLLDIEPALNKELLDVGHWLADETMCFKISAFQAMLPAALKAKYEKQIRLAPGKQ
TNDLPIQIQYLFSKAEAVSWIKIQNDELLSCIKTEIDNGNLEITVQVSDKTKIKKQKYIA
SLLTRNELLEQLDHLNANASNQKKLVSYLVEHPGEQLLAKVLEETNINSSSAIKPLVSKG
IVQITEKEEYRNPYAEGQFTKDQCLKLTDNQQAAINPIKLAIKENRNENFLLYGVTGSGK
TEIYLQSIKQIVDKGKEAIVLVPEISLTPMMVTRFKRRFGDLVAVLHSGLSHGEKYDEWR
KIQRGEVKVVVGARSAVFAPFTNLGLIIIDEEHEGSYKQEETPRYHARDVALKRAAYHNC
PVVLGSATPSLESFARAKKGVYTLLTLNSRVNDQALPAVSVVDMRDEMRGGNRSMFSGLL
FEKLKDRVDKGEQTVLLLNKRGHSSFVMCRNCGLVVTCPNCDISMTYHRVQALMKCHYCG
LEERVPEVCPDCGSDHIRFFGTGTQKVEEELGKLLPHARVIRMDVDTTRRKGAHEALLKK
FEDGQADILLGTQMIAKGLDFPRVTLVGVLTADTMLHLPDFRSSERTFQLLTQVSGRAGR
HELPGEVVIQTYTPEHYSIQLASEQDYDGFFMREMFLRKQNDYPPYYYIALLTISHEDVM
KTVEAAEKIAAFIKRQVGPETVVFGPSASPMSRINNRYRYQCLIKYKREPNLSTILKKLN
ETYGRNATQSGLQLSIDVNPFIMM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaagtaatcgtagatgtaccggcccagcaaacggaccgtccattcgattat
aaaatcccggaaaaatgggccggcattattcgtgagggaatgcgagtgacagttcctttt
ggtccaaggaagttgcttggcttcgtcgtaagaataaaggagcatacagaagtaaagggc
ttaaaatcaatcagcagtttattagatattgaaccagcgctaaataaagaattattggat
gtaggacattggctcgcggatgagacgatgtgttttaaaatatcagcattccaggcaatg
cttccagcagcattgaaagcaaagtatgaaaaacaaatccggcttgctccaggtaagcag
acaaatgatctcccaatacaaatccagtatttgttcagtaaagcggaagccgtcagctgg
attaagattcaaaatgacgagcttttgtcctgtataaagactgaaattgacaatggaaat
cttgaaattactgttcaggtatctgataaaacaaaaataaaaaagcaaaaatatatagcg
tcattgctaacaaggaacgagttgcttgaacaattagaccacttaaatgcgaatgccagc
aatcagaaaaaactagtatcctatcttgtagaacatcctggagagcaattgctggcaaaa
gtgctggaagaaacgaatattaacagttcctctgccatcaaacctcttgtttcaaaagga
atcgttcagattactgagaaagaggaatatcgtaatccatatgcggaaggccaatttaca
aaggatcaatgcctgaagttaacagataaccaacaggcagctattaatccgattaagtta
gctataaaggaaaatcgaaatgaaaatttcctattgtatggtgtaacgggaagcggcaaa
acggaaatctatttacaatccatcaagcaaatcgtagataaagggaaggaagccattgtt
ttggtgcccgaaatttctttaacacccatgatggtgactagatttaagcgacgatttgga
gatttggtagccgtattacatagcggcctgtctcatggtgaaaaatatgatgaatggcgc
aaaatacaacgcggagaagttaaggttgtagttggtgcccgttccgctgtatttgcaccg
tttactaatttaggtctgattattattgatgaggagcatgagggtagttataaacaggaa
gaaacacctcgttatcatgcacgcgatgtagcacttaaacgggcggcctatcacaattgt
ccggttgtcctcggcagtgctacaccgtctctggagagttttgcaagagcgaaaaaaggt
gtatatacgttgttaacattaaatagcagagtaaacgatcaggctttaccagctgtttca
gtcgttgatatgagggatgaaatgagagggggaaaccgctcgatgttctccggcctatta
tttgaaaagctgaaggatcgtgtagacaaaggggaacagactgttctcttgttaaataaa
agaggacattcatcctttgtgatgtgccgaaactgcggactagtagttacatgtccaaat
tgtgatatatcaatgacatatcatcgtgttcaagcgcttatgaaatgccattattgcggt
cttgaagaacgggttccagaggtttgtcctgactgcggcagtgaccatatccgttttttt
ggtacaggaactcaaaaggttgaggaagagctggggaaattgctgccgcatgccagagtc
attcgaatggatgtggatacaaccagacgcaaaggagcacatgaagcgttgctgaaaaaa
ttcgaagatggacaagcagatattcttcttggtacgcagatgattgccaaaggcctcgac
tttccaagagtgactttggtaggggttcttactgcagatacaatgctgcacttacctgac
ttccgctcatcagaacgtacctttcagctactaacgcaggtcagtgggcgtgccggaaga
catgaattgccaggcgaagtggtaattcaaacctatactcctgaacattacagcattcaa
ctggcatcagagcaggattatgacggtttctttatgagagagatgttcttacggaaacaa
aatgactatcctccctattattatatcgcgcttttaacaatttctcatgaagatgtgatg
aaaacggtggaagcagccgagaaaatagcagcatttattaagcggcaggtagggccggaa
acggttgtatttggaccatctgcttccccaatgtctcgaatcaacaatagatataggtac
caatgtctgataaaatacaagcgggaacctaatctaagtacaattttaaaaaaattgaat
gaaacatatggacgtaatgccacccaatcagggttacaattatcgattgatgtcaatccg
ttcattatgatgtaa
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