Pradoshia sp. D12: F7984_06760
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Entry
F7984_06760 CDS
T06218
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
prd
Pradoshia sp. D12
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prd03032
]
F7984_06760 (topA)
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_06760 (topA)
Enzymes [BR:
prd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F7984_06760 (topA)
DNA replication proteins [BR:
prd03032
]
Prokaryotic type
DNA Topoisomerases
F7984_06760 (topA)
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F7984_06760 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
zf_Rg
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QFK70967
UniProt:
A0A5J6XLH4
LinkDB
All DBs
Position
1369916..1371991
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKYKVKASMGHVRDLPKSQMGVDFEHNYQLKYITIRGK
GDVLKDLKTAAKKAKKVYLAADPDREGEAIAWHLAHSLGVDVSSDCRVVFNEITKDAIKE
SFKHPRPIKMNLVDAQQARRVLDRIVGYSISPILWKKIKKGLSAGRVQSVAVRLIIDREK
EIAAFEPEEYWSINGSFLKGKKDFEANFQSLNGKKVPLQSKDDVNNILSKLNGNEFLVQS
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIEIGKEGTVGLITYMR
TDSTRISETAQKEASGWITSQFGEEYLPKTQRKDKQTSGAQDAHEAVRPTGVIREPSMMK
QYLSRDQYRLYKLIWERFVASQMAPAIMDTMAVDLKNGDVVFRANGSKVKFAGFMKVYIE
GNDDNNEEKENLLPDLKEGDVVFSKDIESNQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFVPTELGEIIIEVMSEFFPDILDVEFTAKMENELDNVEDGE
VEWVNIIDHFYKEFEKDLAKAEEEMKEIEIKDEPTGESCEECGSAMVYKMGRYGKFAACS
NFPDCRNTKPIVKEIGVKCPKCHEGNIVERKSKKRRIFYGCDRYPACEFISWDKPIQRPC
PKCQGPLVEKKLKKGIQVTCLDCNYKEEPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggattatttagttatagtggaatcgcctgctaaagcgaaaaccattgaaaaatat
ttaggaaaaaaatataaagtgaaagcatccatgggccatgtacgtgatttaccgaagagc
cagatgggtgtagattttgaacacaattatcaattgaaatatatcaccattcgcggtaaa
ggtgatgtactaaaagatttaaagacagccgcaaaaaaagctaagaaagtctatctcgcg
gctgaccccgacagagaaggggaagcaatcgcgtggcatttagctcatagtctcggtgtg
gatgtaagctctgattgccgtgtcgtatttaatgaaataacaaaagacgcaattaaagag
tcatttaaacatcctaggcctattaaaatgaatctggtagatgcacagcaagcgagaaga
gtattagaccgtattgtgggatacagcataagcccaattctatggaaaaaaataaaaaaa
ggcctaagtgccggacgtgttcaatccgttgctgtacgtctaattatcgatcgtgaaaaa
gaaatagcggcatttgaaccggaagagtattggtccattaatggatcgtttctgaaaggc
aagaaggattttgaagctaactttcaatctttgaatggcaagaaagttccgttgcaatcc
aaagacgatgtaaataatatactttcaaaattaaatggaaacgaattcttagtacaatcg
gtaacgaagaaggagcgaaaacgtaatccagctcctccgtttacaacatcatccctgcaa
caggaagcagctcgtaaacttaatttcagagcaaagaaaaccatgatgattgctcagcaa
ctgtatgaaggtattgagattggcaaagaaggaactgtgggtcttattacgtatatgaga
acggactctaccaggatttcagaaactgctcaaaaagaagcaagcggatggattacatct
cagtttggggaagagtacttaccaaagacccaaaggaaggataagcaaacatctggagca
caggatgcccatgaggcagtaaggccgaccggggtgatcagggaaccttctatgatgaag
caatatctctccagggaccaataccgcttatataaattaatatgggaacgatttgttgcc
agccagatggcgcctgccattatggacacgatggccgtagatttaaaaaacggtgatgtc
gtattcagagcaaatgggtcaaaagtaaaatttgccggttttatgaaagtatatattgaa
ggcaatgatgataataatgaagaaaaggaaaatttactgccagatctgaaagaaggggat
gttgtattttcgaaggacatcgagtcaaatcaacattttactcagccgcctcctcgttat
acagaagcaaggctggttaaaacccttgaggaattaggcattggcagaccatcaacctat
gcgccaacacttgacactatccaaaagagaggctatgtagctctagataataagcgcttt
gttccgacagagcttggcgagattattattgaagttatgagtgaattcttccctgacatc
ctggacgtagaattcacagctaaaatggaaaacgaactggataatgtagaagatggtgaa
gttgaatgggttaatattatcgatcatttctacaaagagttcgaaaaggatttagccaag
gctgaagaagagatgaaagaaatcgaaataaaggatgaaccaacaggcgaatcgtgtgag
gaatgtggatcggcgatggtgtataaaatgggacgttacggaaaatttgctgcatgcagt
aatttcccggattgccggaataccaagccgattgtcaaagaaatcggtgtgaaatgtcct
aaatgtcatgaaggcaatatcgttgaacgaaaaagcaaaaaacgccgcatcttttatggc
tgtgatcgttacccggcctgtgaattcatttcttgggataagccaatacagcgaccttgt
ccaaaatgtcaaggaccgttagttgagaaaaaacttaaaaaaggcattcaagttacatgt
cttgattgcaattataaggaagaaccacaaagttaa
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