Pradoshia sp. D12: F7984_08180
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Entry
F7984_08180 CDS
T06218
Name
(GenBank) extracellular solute-binding protein
KO
K25673
polygalacturonan/rhamnogalacturonan transport system substrate-binding protein
Organism
prd
Pradoshia sp. D12
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prd02000
]
F7984_08180
Transporters [BR:
prd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Polygalacturonan/rhamnogalacturonan transporter
F7984_08180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
CdvA
Motif
Other DBs
NCBI-ProteinID:
QFK71224
UniProt:
A0A5J6XPP5
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All DBs
Position
1676592..1678088
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AA seq
498 aa
AA seq
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MKKASGKLLALLAASQLALSACSNDQDTSGESFAADSKVDVTWTAILHTASPPTDVIHEK
IEKLTNSDITFNWVPDASKEERITAALASGELSEIVSLTMLTNSSVRQSLKSGMFWDVEK
YLDDYENLKMISKDMRKAASIDGKLYGVPFQKDLARSGLLLRKDWLDKLGLDVPTNLDEL
YEVAKAFTEDDPDGNGKDDTFGFSDRNELKYGSFKTLSSYFGAPNTWAVDESGKFSAEFE
TQAYRDTMKYSRDLYKNGYMDRDFAVTPKNNQIEKFAQGKAGIFTGLVSITQLQTMAEGI
QDEMEIVPVNKIKSPDGEYHIWSENSGVGGLMAFPKSEVKSENHLKRLLQFIDDLIGKEA
FMLMTGGIEGTHYEFGENEEFKIIDNDLWQKDVQPFSSSRPSEITHTLIDGNPGKQKVNE
QIKENASFAVLDPTLPLESQTANERGTELEKLIIDATIQYIMGDIDDKGFDEQVEKWKKS
GGDAMKEEFEASYKETNS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcaagcggaaaattattggctttattggctgcttcccagttagcgttgtct
gcatgttcaaatgatcaagatacaagcggtgagagttttgctgctgattcaaaagtagac
gttacttggacagcgattctacataccgcatcaccgccgacggatgttatacatgaaaaa
attgagaagttaaccaattccgatattacgtttaactgggtgccagatgcctccaaagaa
gaaagaataaccgcagccctagcatctggagagctctcggaaattgtgtctttaaccatg
cttacaaattcatctgtcagacaatccttaaaatccggaatgttctgggatgttgagaag
tatctcgatgactatgaaaatttaaaaatgatttcaaaagatatgcgaaaggcagcttcc
attgatgggaaattatatggtgtgccatttcaaaaggatttagctcgatccggcttattg
ctccgtaaagactggttagataagctcggattagatgtaccaacaaatttagacgaatta
tacgaagtagctaaagcgtttacagaggatgatccggacggaaatgggaaggatgatacg
tttggttttagtgaccgtaatgaactgaaatacggtagttttaaaacgcttagttcatat
tttggtgctccaaatacttgggctgtagatgagtcaggaaaattctccgcggaatttgaa
acgcaagcatatagagacacgatgaaatattccagagacttatataaaaatgggtatatg
gacagagatttcgctgtaacaccgaaaaataatcaaatcgaaaaatttgcacaaggtaag
gccggtatctttactggattggtcagcataactcagttacaaaccatggcagagggtata
caagatgaaatggaaattgtccctgtaaacaaaataaagagcccggatggagaatatcat
atttggtctgagaacagtggtgttggcgggctaatggcattccctaaatctgaagttaaa
tcagagaatcatctgaaacgcctattacaattcattgatgatttaataggtaaagaggcg
tttatgttaatgacaggcggaattgaaggaacgcattacgaatttggtgaaaatgaagag
tttaaaattatagataatgatttatggcaaaaagatgtccagcctttctcaagctcacgt
ccaagtgaaattactcatacactcatagatggaaatcctggaaaacaaaaagtaaacgaa
caaatcaaagagaatgcgagctttgctgtattagatccaacgcttccactggaatcacag
acagcaaatgaaagaggaaccgaacttgaaaagctgatcatcgatgctactattcaatat
attatgggagacattgacgataaaggatttgatgagcaagttgaaaagtggaaaaaatct
ggcggagatgccatgaaagaagaatttgaagcatcctataaggaaacaaattcctaa
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