Pradoshia sp. D12: F7984_09270
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Entry
F7984_09270 CDS
T06218
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prd
Pradoshia sp. D12
Pathway
prd03030
DNA replication
prd03430
Mismatch repair
prd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F7984_09270
03430 Mismatch repair
F7984_09270
03440 Homologous recombination
F7984_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prd03032
]
F7984_09270
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_09270
Enzymes [BR:
prd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F7984_09270
DNA replication proteins [BR:
prd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F7984_09270
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F7984_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_B_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QFK71411
LinkDB
All DBs
Position
complement(1905329..1906063)
Genome browser
AA seq
244 aa
AA seq
DB search
MGMNDFIEFFRGMSGKISSNVLAGVQGQATPQNISFMRQLEKEARKKDDLNCPLDQLDVV
VFDIETTGFFPDKGDQMISIGAVKMHGCEILTEESFYSLIKTDIPLSPEITSLTNITGKE
LQAAPESSDVLMNFFKFVSTKSLVAHHSQHEQSFMHKFTWDVTRTKFQHRILDTSFLTQL
FNPVSSSNALEDLCAGCGIEIKNRHHALGDAFMTARLWGYYLSKAQEAGFKNLSEIYNHI
ARYR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaatgattttatcgaatttttcagaggaatgagcggtaagatcagttcgaac
gtactcgccggtgtacaggggcaagcaactccgcaaaatatctcttttatgcgacagcta
gaaaaggaagcgcgtaaaaaggacgatctaaattgtcctcttgatcagcttgatgtggtt
gtgtttgacatcgaaacaacaggatttttccctgacaaaggtgatcagatgatctctata
ggtgctgtgaaaatgcatggatgtgagatattaactgaagaaagcttctattcactgatt
aagacggacatccctttatctcctgaaattacttctctaacgaatattacaggtaaagaa
cttcaagccgctccggagagttcagatgtcctgatgaatttctttaaatttgtctcgact
aaaagtctggttgcccatcattctcagcatgagcaaagctttatgcacaagttcacttgg
gacgtgactcgaacaaaattccagcatagaatccttgatacttctttcttaacacaacta
tttaatcccgtcagcagctcaaatgccttagaagacttatgtgctggatgcgggatagaa
atcaaaaatagacatcacgcattgggagatgccttcatgacggcccgcttatggggctat
tatctatcaaaagcccaggaagcaggttttaaaaaccttagtgaaatatataatcacata
gccagatataggtaa
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