Pradoshia sp. D12: F7984_10345
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Entry
F7984_10345 CDS
T06218
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prd
Pradoshia sp. D12
Pathway
prd03420
Nucleotide excision repair
prd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7984_10345
03430 Mismatch repair
F7984_10345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_10345
Enzymes [BR:
prd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7984_10345
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7984_10345
MMR (mismatch excision repair)
Other MMR factors
F7984_10345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
AAA_30
AAA_11
ResIII
AAA_14
SLFN-g3_helicase
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QFK71602
UniProt:
A0A5J6XML9
LinkDB
All DBs
Position
complement(2162972..2165278)
Genome browser
AA seq
768 aa
AA seq
DB search
MVICLVFQTGILEIYKERIGERVISSINQEIEEEKQRLEFIKKYMQVVIDTAETNKEQFM
EKMKDIFKDEDWVESAGYSQLLTSASFYQLSRSELESLIKALPKPYFARVDFTSREAGGM
EKLYFGKTSLFQRDNQEQLIIDWRSPIANLYYEGRLGEVSYTSEGETYDGTISLKRQFII
EDGELLDIRDIDVTTVDELLQESLAGSSANRLTEIVATIQEEQNQIIRADLNKPIIVQGA
AGSGKTTIALHRISYFLYHYKDVFQPEQLLILAPSFLFLDYISEALPELGVEKVRQMTFQ
GYVEEVLGKKIKLTEDTKLRDILKDQQFVHISSIKGSSLFQGVLDHYVEEIKTSLMVHED
FRVDKFKLYTAKQFNHLLYNEYTYLPLYKRIEKLKKVLQNQVRLNKDKMLKKVVQHYEVR
IDRALNWKGDEKKRKQYISLALDKKEARINDLKMEIKKAVQDYMSYFDKRDIWTLYKELY
SDPDRLVQYSDHKLSKKEALELCESSQNIFSKKKYELEDLGPILYLYAKIYGVKPEKKAK
NVVIDEAQDYSFLQLQGLKTALETDMFTLVGDLAQGIHSYRGITDWQEVRKSIFPRAIYR
ELKKSYRTTVEIMNEANQLLKRLSTSFPEVEPIIRHGKPPVFLEITSDEEWAEQMSNQVR
KLKEEKFNTFAIITKTEEDAAIVNSILKQHTELDLYLLEETTSIPKDKIVIVPSYLAKGL
EFDAVFAVTYNEVYSDNHEIDIKLLYVVMTRALHRLILMGKQKRAFIL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggtaatttgtttagtctttcaaacaggaattcttgaaatatataaagaaaggataggt
gaaagagtgataagtagtataaatcaggagattgaagaggagaaacaacggctcgaattt
ataaaaaaatacatgcaggttgtcattgatacagctgaaacaaacaaagaacaatttatg
gaaaaaatgaaggacatttttaaagatgaagactgggtagagagtgcggggtattcgcag
cttttaacgagtgcaagcttctatcagctatcaaggtccgaactggaaagtttaattaag
gcattacctaaaccatattttgcgcgggttgatttcacttctcgtgaggctggcggaatg
gagaagctttattttggaaagacatccttattccaacgtgacaatcaggagcaattgatc
atcgattggcgttcacctattgctaatttatactatgaaggccggttgggagaagtgagt
tacacatcagaaggtgaaacttatgacggtaccattagtctaaaaaggcaattcatcatt
gaggatggagagttgcttgacatacgggatatcgatgttacgacggtggatgaattattg
caggagtctcttgccggcagttctgccaatcgattaacagagattgttgcaacgattcag
gaggagcagaatcaaatcatacgagcggatttaaataaacctattattgtgcagggagct
gcaggaagtgggaagacaactattgctttgcaccgtatttcatattttttgtatcactat
aaagatgtattccagcctgagcaattattaattttagcaccaagctttttattccttgat
tatatttcagaggcactcccggaactcggtgttgagaaagtaaggcaaatgacctttcag
ggatatgtggaagaggtgctggggaagaaaattaaattgacagaggatactaagcttcgt
gacatcctcaaggatcaacaattcgttcacatctcaagcatcaaaggttcctctctattt
caaggggtgcttgaccattatgttgaagaaataaaaaccagtttaatggtgcatgaagac
tttcgggttgataagtttaaattgtatacagcaaaacagtttaatcatcttttatacaat
gagtatacatatttgccgctttataaacgaatcgagaaactaaaaaaagtccttcaaaat
caagtacgtttgaataaagataaaatgctgaaaaaagtagttcagcattatgaggtcaga
attgacagggccttaaactggaagggtgatgagaaaaagcggaagcaatacatttcgctg
gctttggataaaaaagaggcgaggatcaatgatctgaaaatggaaatcaaaaaagccgtc
caggattatatgagctattttgataagagagatatatggacactttataaagaattatac
agcgacccggacaggctggttcaatactcagatcataaactcagtaaaaaagaggcgtta
gagctttgcgaaagcagtcagaatatcttttctaagaaaaaatatgagcttgaggacttg
ggccctattctgtatttatatgcaaaaatttatggagttaagccggagaaaaaggcaaag
aatgtagtgattgatgaggcgcaggattatagctttttgcagcttcaagggcttaaaaca
gctttggaaacagatatgtttacccttgtcggtgatttggcgcagggcatccattcttac
cggggaataaccgactggcaggaagtaagaaaatccatttttccaagagccatttatcga
gagctgaaaaagagttaccgaacaaccgtcgagattatgaatgaagccaatcaattatta
aaacggctatccacttcatttccggaggttgaaccaatcattcgacatggcaaaccacct
gtatttttagagatcacatctgatgaggaatgggctgaacagatgtctaatcaagtaagg
aagttaaaggaagaaaaattcaatactttcgcgattattacaaagactgaggaagatgca
gcgattgtaaattccattcttaaacagcatactgagctagacctctatttacttgaagaa
acgacatctattccaaaggataaaatagtaattgtaccgtcgtacttagcgaagggattg
gagtttgatgctgtatttgctgtcacatataatgaagtatactcggataaccatgagatc
gatattaaactattgtatgttgtaatgaccagagctcttcaccgactgatactaatgggg
aaacagaagagggcatttattctctaa
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