Pradoshia sp. D12: F7984_12845
Help
Entry
F7984_12845 CDS
T06218
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
prd
Pradoshia sp. D12
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prd01002
]
F7984_12845
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prd01011
]
F7984_12845
Peptidases and inhibitors [BR:
prd01002
]
Cysteine peptidases
Family C40
F7984_12845
Peptidoglycan biosynthesis and degradation proteins [BR:
prd01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
F7984_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM_OapA
CHAP
LRAT
Motif
Other DBs
NCBI-ProteinID:
QFK72054
UniProt:
A0A5J6XSD0
LinkDB
All DBs
Position
2675160..2676605
Genome browser
AA seq
481 aa
AA seq
DB search
MKHIKVVTLTAAAIMSTAFAQEASAASTYTVKKGDTLSFIASKFKTTVSNLKKLNDLTGD
IIYPNQVITVSSSTSSSGITERSISSKTYTIKSGDTLSAIAAKHSTTVSKLKSWNDLKND
LIYPGQIIKVAEGASGSSSSTNHSSSGSTSVSTNQTYTVKSGDTLSKIARKYSTTVSQLM
SWNNLSSTVIYPNQTLKVTKSSTTTGSSSSSSTSSSSSSSSATTYTVKSGDTLSKIANKH
SITVSQLKSWNNLSSTIIYPNQVLKVSKPSTTTGSSSSSSSSGSTATSTTYTVKSGDTLS
KIAKTYSLTVSQIKSMNGLKSDVIYVGQKLKISKAASDLPSVSEPSSGSSSAQETIGNSA
FTSNLISISKSLIGTKYVWGGTTPSGFDCSGFLYYVFNKAGHSMPRYTAEGFFNRSYYVS
SPQPGDLIFFSGTYKKGISHLGIYLGNNEFIHADNSGVRITSTNNSYYKKHFDSYKRLYA
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatataaaagttgtgaccctcactgcagctgcaatcatgtccactgcttttgct
caagaagcctctgcagcatcgacatatacagttaaaaagggggatacactttcttttatt
gcctcaaaattcaaaacaacggtttcgaatttaaagaagttgaatgatttgacaggtgac
attatttatccaaaccaagtcatcacagtatctagtagtacatcatcatccggtattacc
gaacgttctatcagttctaaaacttacaccattaaatcaggagatactttatcagcaata
gctgctaagcactctacgactgtaagtaaactaaagagctggaatgatttaaagaatgat
ctcatttaccctggtcaaattattaaagtggccgaaggtgcttccggatcctcatcaagc
accaatcattcttcttccggaagtacatcagtgtctaccaatcagacatatacggtaaag
tcaggagacacattaagtaaaatcgcccgtaaatattcaactacggtcagtcagcttatg
agctggaacaacctatcgagtacagttatttatccgaatcaaacgttaaaggtgactaag
tcttcaactactactggatctagcagttcaagttctacaagttcttccagcagtagttca
tccgctactacttatacggtgaaatctggcgatacgttaagtaaaattgccaacaagcat
tcaattacagtcagtcaacttaagagctggaataacctatccagtacaattatttaccct
aaccaagtgttaaaggtgtctaagccttctactactacagggtcaagcagctcttcaagc
tcttccggcagtactgctacttcaacgacctatacagttaagtcgggggatacgctaagt
aagattgctaaaacctattccttgaccgtttcacaaatcaaatcgatgaatgggttaaaa
tctgatgtgatttatgtggggcaaaagctgaaaatttcaaaggcagcaagtgatttgcct
tctgtttccgaaccttcaagcgggtcttcttccgctcaggaaacaataggaaactcagct
tttacatctaatctgatttccatcagtaaaagcttgatcggcacaaaatatgtgtgggga
ggaacaacaccatctgggttcgattgcagcggttttctttattatgtctttaataaagcg
ggacattctatgccaagatacacggctgaaggtttctttaatcgttcctattatgtaagt
tctcctcagcctggagatctcattttcttttccggtacatataagaaaggaatctcccat
ttaggcatctatctaggaaataatgaatttattcatgctgataacagcggagtacgtatt
actagtacaaacaacagctattataaaaaacattttgatagttataagcgattatacgct
aattaa
DBGET
integrated database retrieval system
