Pradoshia sp. D12: F7984_14240
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Entry
F7984_14240 CDS
T06218
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
prd
Pradoshia sp. D12
Pathway
prd02024
Quorum sensing
prd03060
Protein export
prd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
F7984_14240 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
F7984_14240 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F7984_14240 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prd02044
]
F7984_14240 (secDF)
Secretion system [BR:
prd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
F7984_14240 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
MMPL
INSIG
Motif
Other DBs
NCBI-ProteinID:
QFK72318
LinkDB
All DBs
Position
complement(2966555..2968822)
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AA seq
755 aa
AA seq
DB search
MVKRSRILAFFLIVIVLGVTFVGTTSNIMQNIKLGLDLQGGFEVLYKVEPAKDGQKIDEK
AMAATASALDRRINVLGVSEPSIQVEGNNRIRVQLAGVDDQEKARELLSTQANLTFRDVN
DKVRMDGGDLKEGGASQSFDSQTNQPIVQVQLKDADKFGQVTRDILAMAPENQLAIWLDF
EEGKDSYKEEITKEDPKFISAPNVNQVINSDTAVISGDFTVEEAKDLAEILNAGALPVKL
NEIYSTSVGAKFGEEALNKTLLAGIVGILAIFIFMVAYYRFPGAIAVVSLSAYIYLIILV
FDWMNAVLTLPGIAALILGVGMAVDANIITNERIRDEIRKGRSIKAAYKEGNKHSLSTIM
DANITTLLAAAVLFYFGTSSVKGFATSLIVSILVSFITAVYGTRLIMSLWVNSNFLNNRP
GWFGVKKSDIHDLNEFKKDKYLPTKFDKWDFIKPAKKFFIFSIILTIIGVGSLFVNGLNT
GIDFSSGSRIQINADKELSVGEIQKDLTENEIDSQDIVMAGEGNKSAVVRTKDVFSKDEI
AELNNYFDSKYGHNPNISTVSPTIGKELAKNALIAVAIASIGIVIYATLRFEWRMALPSI
LALLHDAFMIITIFSIFRIEVDLTFIAAVLTIIGYSINDTIVTFDRIRENMQMKKRIKTQ
EEINEIINISVRQTMVRSINTVLTVLVTVLAMMFLGSESIFNFNLALLIGLVTGMYSSIL
LAAPIYGILKGKELKKKGVIKTYKEKRVNNDQPQV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggttaagagaagtagaatcctggctttcttccttattgtaatcgtattaggagttacc
tttgttggtacaacatctaatatcatgcaaaacattaagctgggccttgatttacagggc
gggtttgaagttctttataaagtggagccagcaaaagatggacaaaaaattgatgaaaaa
gcaatggcggctactgccagcgcattggaccgaagaattaatgttctcggtgtcagtgaa
ccgagcattcaagttgaaggcaataatcggatccgtgtacagctagcaggcgtagatgat
caggagaaagcaagggaacttctatcaacgcaagccaatctaactttccgtgatgtgaac
gataaagtaagaatggatggcggggatttaaaagaaggaggagccagccaatcttttgat
agccaaaccaatcaacctattgtacaggtccaattaaaagatgcagataaatttggacaa
gttacaagggatattttagccatggcgccagagaatcaactagctatttggctagatttt
gaagaaggaaaagattcctataaagaagaaatcacaaaagaagatcctaaatttatttca
gcaccaaacgtgaatcaagtgatcaattcagatacagccgttatttcaggtgactttact
gtagaagaggctaaagacctcgctgaaattttaaatgcaggtgccctgccggttaaactg
aatgagatctattcaacatctgtaggtgctaaattcggtgaagaagcattaaataaaacg
ctattagctggaattgttgggatcctggctatctttatctttatggttgcttattaccga
ttcccaggcgcgattgcagttgtctcattgtctgcctatatttatttaatcattctcgta
tttgattggatgaatgctgttcttacattgccaggtatagcagccctcatacttggggtg
gggatggcggtcgatgcgaacattattacaaatgaacggatccgggacgaaattcgtaaa
ggacgttccattaaggcagcctataaagaggggaataagcactccttgtctacaataatg
gatgccaatattaccactttacttgcagcagctgttctgttttattttggaaccagttca
gtcaaaggctttgcgaccagtttgattgtcagtatattagtcagctttataacggctgtg
tatggtacaagattgattatgtccttatgggtgaacagtaacttccttaacaatcgccca
ggctggtttggggttaagaaaagcgacattcatgatttaaacgaatttaaaaaggataaa
tatttacctacgaagtttgataaatgggatttcattaagcctgcaaagaaattctttatc
ttttctattatattaaccataattggagtaggatccttatttgtaaatggtttaaataca
ggtatcgatttttccagtgggtccagaattcaaatcaatgctgataaagaactatcagta
ggtgaaatccaaaaagatcttactgaaaacgaaattgattcgcaagatatcgttatggca
ggtgagggtaacaagtcggctgttgtgcggacgaaagatgtcttttcaaaagatgaaatt
gcagagctaaacaattactttgattccaagtatgggcataatccgaatataagtacggta
tccccgacaataggtaaggagttagccaaaaatgcgctgattgcggtagcgattgcttca
attggtattgttatttatgcgaccctacgctttgagtggagaatggctctaccttctata
ttggcgctcctgcacgatgcgtttatgataataacgatatttagtatttttagaatcgaa
gtggatttaacctttatagccgctgtattaaccatcattgggtattcgatcaatgataca
atcgttacgtttgaccgtattcgtgagaatatgcaaatgaaaaaacgcattaagactcag
gaagaaattaatgagattatcaatatcagtgttcgccaaacaatggtcaggtctatcaat
actgttctaactgtgttagttactgtgttggcgatgatgttccttggaagcgaatcaatc
tttaattttaaccttgctctattaatcggtttggtaactggtatgtattcttctattctg
cttgcagcccctatttatggaatcctaaaaggcaaagagctgaagaagaaaggtgttatc
aaaacatataaagaaaagcgcgtaaacaacgatcaaccacaagtttaa
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