Pradoshia sp. D12: F7984_16020
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Entry
F7984_16020 CDS
T06218
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prd
Pradoshia sp. D12
Pathway
prd00061
Fatty acid biosynthesis
prd00071
Fatty acid degradation
prd01100
Metabolic pathways
prd01212
Fatty acid metabolism
prd02024
Quorum sensing
prd04146
Peroxisome
Module
prd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F7984_16020
00071 Fatty acid degradation
F7984_16020
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F7984_16020
09145 Cellular community - prokaryotes
02024 Quorum sensing
F7984_16020
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prd01004
]
F7984_16020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prd04147
]
F7984_16020
Enzymes [BR:
prd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F7984_16020
Lipid biosynthesis proteins [BR:
prd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F7984_16020
Exosome [BR:
prd04147
]
Exosomal proteins
Exosomal proteins of breast milk
F7984_16020
Exosomal proteins of breast cancer cells
F7984_16020
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QFK72623
LinkDB
All DBs
Position
complement(3317867..3319744)
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AA seq
625 aa
AA seq
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MKPANLVEMVWRTAEKNSQKNGFLVKVAGEYKGITYRDFWIQVSQTAAGLAHYGVGFGDH
VAILSDNNPYWAISDIAIMSLGAVSVPIHSTLPSDQISYILSNADCKFLFVENQKQLQKI
LANSTLDKLIIFYPGDSLAEKKEDMLTMEQLMSAGEKHPLFNWEDEFQAITRDDLATIIH
TSGTTGYPKGAMLTHGNILSNVEGVQFWVLEARPDDIMLSHLPLSHIFERMAGQFFPLSV
GATIAYAENIDTVQQNLLEVQPTILVSVPLLFEKVYAQAQKMVESGTPIRRKIFDWALKV
GNTRYKYYLSSATDVMVRKSELPKEFRRKWKIADKLVYQKVKKQLGGRIRGFISGGGALN
PEIGKFFWSVDLPVLEGYGLTETSPVICVNPFSRTKVGTVGKPLPNLDVHISDDGEVLVK
GPSIMKGYYHDEEATKEHFENGWFKTGDIGEFDEDGFLRIVDRKKRIIVLTSGINVAPQP
VENALHQSIYIENAVLVGQNQKYVIVLLTLNYENLKSWCKRKGIRGSVNELVTNKKVQEL
ITREVKSNTHKFARYEQPKKLIIVTKEWTVEGGEMTPSLKVRFKEIEEKYKEVIEQMYEE
DAYAEIEVAANEVAVGLSLPKSKGD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgcaaatttggtagagatggtttggagaacagccgaaaaaaattcacaaaag
aatggttttttggttaaagtagcaggtgaatataaggggatcacatacagggatttttgg
atacaggtttcacaaacggctgccggactggcacattatggggttggctttggtgatcat
gtagccatattatctgataataatccttactgggctataagcgatatagcgattatgagt
ttgggtgcagtcagtgtgccaatccattcaactttaccatctgatcagatttcttacatt
ctcagtaatgcagactgtaagtttctttttgtagaaaatcaaaagcaactgcaaaagatt
cttgctaattctactctcgataaactgattatcttttatcccggtgattccttagcagaa
aagaaagaagatatgctgacaatggaacaattaatgtcagcaggtgaaaaacatccttta
tttaactgggaagatgagttccaggcaataacaagagatgatttagcaacgattattcat
acctcgggaacaactggttatccaaaaggtgcaatgttaacgcatggaaatattttatca
aatgttgaaggcgttcaattttgggtgttggaagcccggcctgacgacatcatgttatcc
cacttaccactatcccacatatttgaacgtatggcaggtcaattttttcctttgtcagtt
ggtgcaacaattgcttatgcagaaaatattgataccgtacaacaaaaccttctagaagta
caacctaccatcctagtcagtgtcccattgttatttgaaaaagtatatgcccaggctcaa
aagatggtcgaatccggtacccctattcgcagaaaaatttttgactgggcacttaaagtc
ggaaatacaagatataaatattatttatccagtgctacagatgtaatggttcgtaaaagt
gaactaccgaaagagtttaggagaaagtggaaaatagctgataaacttgtctaccaaaaa
gtaaaaaaacaattgggtggaagaatcagaggctttatatcaggcggaggagctttaaat
ccagaaatcgggaagtttttctggagtgttgatcttccggtccttgaaggatatggcctg
acagaaacctcccccgttatctgcgtaaatccgttttccagaaccaaagttggaacagta
ggaaaaccattgccgaacctggacgtccatatctcagatgatggtgaggtacttgttaaa
ggcccaagtatcatgaaaggttactatcatgatgaagaggctaccaaggaacactttgaa
aatgggtggttcaagactggcgatataggcgagtttgatgaagatggcttcttaagaatt
gtggatcgaaagaagcggattatagtacttacttcggggataaatgtggctccacagcct
gtggaaaatgcacttcaccaaagtatttatatagaaaatgccgttttggttggacaaaat
cagaagtatgtaatcgtcttattaactctaaattatgaaaatcttaagagctggtgcaaa
aggaagggcattcgtggttctgtcaatgagttggttacgaataaaaaagtacaggaattg
attacgagagaagtaaaatccaatactcataaattcgcacgctatgaacagcccaaaaaa
ctaatcattgtaacgaaagaatggactgtggagggtggggagatgactccgtccttaaag
gtacgttttaaagaaatagaagaaaagtataaagaagttattgaacaaatgtatgaagaa
gacgcatatgcagagatcgaggtagctgctaatgaagtagcagttggcctgtcattgcct
aaatcgaaaggagattaa
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