Pradoshia sp. D12: F7984_17190
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Entry
F7984_17190 CDS
T06218
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
prd
Pradoshia sp. D12
Pathway
prd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7984_17190 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_17190 (uvrB)
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7984_17190 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F7984_17190 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UFL1
AAA_19
P-loop_SecA
UB2H
AAA_7
AAA
AAA_22
TrwB_AAD_bind
AAA_30
Kinesin
HEM4
Motif
Other DBs
NCBI-ProteinID:
QFK72831
LinkDB
All DBs
Position
complement(3559035..3561011)
Genome browser
AA seq
658 aa
AA seq
DB search
MSKQFELVSKYTPQGDQPTAIKELVNGINNGVKHQTLLGATGTGKTFTISNVIKETNKPT
LIIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSALFERKDVIIIASVSCIYGLGSPEEYGEMVLSIRVGMEMERNQLLRKLVDIQ
YERNDINFQRGAFRVRGDVVEIFPVSKDEHCVRVEFFGDEVERIREVDALTGEIIGERDH
VAIFPASHFVTREEKMRIAIQNIETELEEQLTFLRGEGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLIDYFPKDFLMVIDESHVTVPQVRGMYNGDRARKEV
LVNHGFRLPSAMDNRPLQFQEFEEHVNQIVYVSATPGPYEQEHSPEMVEQIIRPTGLLDP
TIDVRPIEGQIDDLLGEINERITRDERVLITTLTKKMSEDLTDYLKELGIKVQYLHSEIK
TLERIEIIRDLRLGKYDVLIGINLLREGIDIPEVSLVAILDADKEGFLRSERSLIQTVGR
AARNSNGHVIMYADKITNSMEIAISETKRRRAIQEEYNRKHGIVPKTIQKDIRDVIRATH
ITEDEEEKAANKYEKLSKKERQKVIANMEKEMKEAAKALDFERAAELRDLILELKVEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaacaatttgaattggtttccaagtatactcctcaaggagaccagccaactgca
attaaagagctagtgaatggaattaataatggcgttaagcatcaaacgctgcttggcgct
actggaaccggaaaaacattcacgatttcaaacgtgataaaagagactaataagcccacc
cttatcattgctcataataagacgcttgctggacagctgtacagtgaatttaaagagttc
tttccgaataatgcagtcgagtattttgtcagttactatgactactatcagcctgaagcg
tatgtacctcagactgatacctttatagaaaaggacgccagtattaatgatgagatagat
aaactgcgccactctgcaacatctgcattatttgagcggaaggatgtcattattattgcc
agtgtgtcctgtatttatggcttgggttctccagaagaatacggggaaatggttttatcc
atacgagttggcatggaaatggagcggaatcagctattacgtaaattggtcgacattcaa
tatgaacgaaatgatattaactttcaacgcggagcatttcgagtaagaggagatgtagta
gagatttttccagtctcaaaggatgaacactgtgtacgtgttgaatttttcggcgatgaa
gtggaacggatcagagaggtggatgcgctgactggagaaattatcggcgaaagagatcat
gtagctatcttccctgcatcccacttcgttacaagagaagaaaagatgaggattgctatt
caaaatattgagacggaattggaagagcagctcacctttttaagaggtgaaggaaagctt
ctcgaagcacagcggttggagcaaagaacccgttacgatcttgaaatgatgagagaaatg
ggcttttgttcaggaatcgagaactattcccgacatctgaccttaaggccgccgggctct
accccctatacccttatcgattatttccctaaagactttttaatggttatagatgaatcc
catgttacagtcccgcaggttcgcggaatgtataatggagaccgcgcccggaaagaggta
cttgtcaatcatggtttccgtttgccgtccgcaatggataataggcctttgcaatttcag
gagtttgaagaacatgtcaaccagattgtttatgtatctgctacaccggggccttatgaa
caggagcattcaccggaaatggttgaacagattatccgtccaacaggactgctggatcca
actattgatgttcgcccgattgaaggtcaaattgatgacttgttaggggaaattaacgag
agaatcacaagggatgagcgtgtcctaatcactacattgactaagaaaatgtctgaggat
ttaacggattatttaaaagagcttggcatcaaggttcaatatttacactctgagattaaa
acactcgaacgaatcgaaatcatcagagatctgcgtcttggaaaatatgatgtgttgatt
ggaataaatctactgcgtgaagggattgatattccggaggtctcactcgtagctattctt
gatgcggataaagaaggattcctgcgttcagaacggtctcttattcaaacggtcggccgt
gctgcccgtaattcaaacggtcatgttattatgtatgcagataaaataacgaattccatg
gaaatagcgatttcagagactaaaaggcgccgtgcgattcaggaagagtataacaggaaa
catggcatcgttcccaagacgattcagaaggatattcgcgatgtcattcgggccactcat
ataacggaagatgaagaagaaaaagctgcaaataaatacgagaaactttccaagaaagag
cgtcaaaaagtaattgcaaatatggaaaaagaaatgaaggaagcagccaaagcgcttgat
tttgaacgtgctgccgaacttagagatttaattttagagttaaaagtggaaggatga
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