Pradoshia sp. D12: F7984_18165
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Entry
F7984_18165 CDS
T06218
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
prd
Pradoshia sp. D12
Pathway
prd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F7984_18165 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prd03021
]
F7984_18165 (rpoE)
03400 DNA repair and recombination proteins [BR:
prd03400
]
F7984_18165 (rpoE)
Transcription machinery [BR:
prd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F7984_18165 (rpoE)
DNA repair and recombination proteins [BR:
prd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F7984_18165 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QFK73015
LinkDB
All DBs
Position
complement(3780441..3781016)
Genome browser
AA seq
191 aa
AA seq
DB search
MKLANLSKEEVSEMAYIEIANVLLIEKKEAIDFKVMMDKIQKLLGLTDEEVSAKMGQFYT
DLNVDGRFISIGDNRWGLKGWYPVEQVEEETVPASKVKKKKKGKKALVDDFDDEDEVLDF
DDLDDFDDDDDEDDSLIDDFDDIDDIDDDEDDDDEDLIEDEVIVEDDYDLDDEEEEEEDL
VIDEEEEDDNR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagccaacctgtctaaggaagaagtaagtgaaatggcttacattgaaattgcg
aacgtgttacttatagaaaagaaagaagcaatagattttaaggtaatgatggataaaatc
caaaaattacttggtttgacagatgaagaagttagtgcaaaaatgggccaattctataca
gatctaaatgtagacggccgttttatcagtattggagacaatcgctggggactaaaagga
tggtaccctgttgaacaagttgaagaagaaacagttccagcttctaaagtgaagaagaag
aaaaaaggcaaaaaagcactcgttgatgactttgatgatgaggatgaagttcttgatttt
gatgatcttgatgacttcgatgacgacgatgatgaggatgattctttaattgatgatttc
gacgatatcgatgacatcgatgatgatgaggatgatgatgacgaggatctaatcgaggac
gaagttatcgttgaggatgattatgatcttgacgacgaagaagaagaggaagaagatctt
gtgattgacgaagaagaagaggacgacaatcgctaa
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