Metapseudomonas resinovorans: PCA10_00990
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Entry
PCA10_00990 CDS
T02708
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pre
Metapseudomonas resinovorans
Pathway
pre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCA10_00990 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pre03400
]
PCA10_00990 (recD)
Enzymes [BR:
pre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PCA10_00990 (recD)
DNA repair and recombination proteins [BR:
pre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCA10_00990 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SLFN-g3_helicase
UvrD_C
nSTAND3
AAA_16
AAA_28
CbiA
Terminase_6N
DEAD
T2SSE
Flavi_DEAD
AAA
Motif
Other DBs
NCBI-ProteinID:
BAN45831
UniProt:
S6APZ5
LinkDB
All DBs
Position
105272..107122
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AA seq
616 aa
AA seq
DB search
MSLADWSLGPLERHFTETLQRLDPQAGETVLAAAALCCRALAEGDVCLPLARLAGQPLFV
ESGSGLLAPALPAWLAALAASPLVAQPGGYAPLTLDGARLYLSRYHAYEARLAQSLLQRA
TARPQVDEAQLSESLARLFARNTQQPDWQRLAAAQAVRRDLAVISGGPGTGKTTTVVRLL
AALLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKAELPVSDAIKAALPEEARTLHRLLG
SRGDSPQVRHHADNPLPLDVLVVDEASMVDLALMAKLLDALPPSARLILLGDKDQLAAVE
AGAVFAELCEGRGLDAGAAAELTRITGQAVPVETPRSRLGDAVVLLTHSHRFAGDSGIGE
LARRINTGDARGTLELLRGGHPDLTWNAGPTPAALLERLEAGYAPYFAAVRAADPASAFA
AFNGFRALTAQREGPWGVGGINEALEARIKRRLGVASRERWYPGRAVMVRQNDYALGLFN
GDIGLCLNTGHGLRVFFEGDEAYRPFAPARLPSHDSAFAMTVHKSQGSEFTEVLLALPEQ
PSPLLSRALFYTGITRAKQKVEIWGLPARLSEAVSTKAERAAGLAERLGVTGLVAPVVEP
VPAPDQRRDQDQLSLF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggccgactggtccctggggccgctggagcgccatttcaccgagaccctgcag
cgtctcgacccgcaggccggggagaccgtgctggccgccgcggccctgtgctgccgcgcc
ctggccgaaggggatgtgtgcctgccgctggcccggctggccggacaaccgctgttcgtc
gagagcgggtccggcctgctggcacccgccctgcccgcctggctggcggcgctggccgca
tcgccgctggtggcgcagccgggcggctacgcccccctgaccctggatggcgcccgtctc
tacctcagccgctatcacgcctacgaggcgcggctggcccagagcctgctgcagcgggcc
acggcgcgaccccaggtggatgaagcgcaactgagcgagtccctggcgcggctgttcgcc
cgtaacacccagcagccggactggcagcgcctggccgccgcgcaggccgtgcggcgcgac
ctggcggttatctccggcggccccggcaccggcaagaccaccaccgtggtgcgcctgctc
gcggcgctgctggaacagcctggcggcgagcgcctggccatcggcctggccgcgcccacc
ggcaaggccgccgcgcgcatggccgaggccatccgcaacgccaaggccgagttgccggtg
agcgacgccatcaaggcggcgctgcccgaagaggcgcgcaccctgcaccgcctgctgggc
agccgcggcgacagcccgcaggtgcggcaccacgccgacaacccgctgccgctggatgtg
ctggtggtggacgaagcctcgatggtggacctggcgctgatggccaagctgctcgatgcc
ctgccgcccagtgcgcggctgatcctgctgggagacaaggaccagttggcggccgtggaa
gccggtgcggtattcgccgagctctgcgaaggccgtggcctggacgccggcgccgccgcc
gagctgacccgcatcactggccaggcggtgccggtggaaacgccccgctcgcgcctgggg
gacgccgtggtgttgctgacccacagccatcgcttcgccggcgacagcggcattggcgaa
ctggcgcggcggatcaacacgggtgatgcccgaggcaccctggagctgctgcgcggcggc
caccccgacctgacctggaatgccggtccgaccccggctgccctgctggagcgactggaa
gcaggctacgcgccctacttcgccgccgtgcgtgcggccgacccggcctcggcgttcgcc
gccttcaacggcttccgcgccctcacggcacaacgcgagggcccctggggcgtgggcggt
atcaacgaagccctggaagcacggatcaagcgccgcctcggcgtcgcctcgcgggagcgc
tggtaccccggccgcgcggtgatggtgcggcagaatgactatgccctgggcctgttcaat
ggcgacatcggcctgtgcctgaacaccggccatggcctgcgggtgttcttcgagggggac
gaggcctaccggcccttcgccccggcgcgcctgcccagccacgacagcgccttcgccatg
acggtgcacaagagccagggctcggaattcaccgaggtgctgctggccctgccggagcaa
cccagtccgctgctcagccgcgcgctgttctacaccggcatcacccgggcgaagcagaaa
gtggaaatctggggcttgccggcgcgcctgtccgaagccgtctcgaccaaggccgagcgc
gcggcgggcctggccgagcgcctgggggtgacgggcctcgtcgcgcctgtggtcgagcct
gtgcctgcgccggaccagcggcgggatcaggaccagttgagcctgttctga
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