Metapseudomonas resinovorans: PCA10_06160
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Entry
PCA10_06160 CDS
T02708
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pre
Metapseudomonas resinovorans
Pathway
pre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCA10_06160 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pre03021
]
PCA10_06160 (rpoA)
03400 DNA repair and recombination proteins [BR:
pre03400
]
PCA10_06160 (rpoA)
Enzymes [BR:
pre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCA10_06160 (rpoA)
Transcription machinery [BR:
pre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PCA10_06160 (rpoA)
DNA repair and recombination proteins [BR:
pre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PCA10_06160 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF22
Motif
Other DBs
NCBI-ProteinID:
BAN46348
UniProt:
S6ALR4
LinkDB
All DBs
Position
675918..676919
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAVKLHGRDEVTLSLSKKGPGVVTAADIQLDHD
VEIVNGDHVIANMADNGVLNMKLKVSRGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQHQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccacattgatgtgcaggtggtcagt
ccgacccgcgccaagattacgctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgaa
atcgacggcgtactccatgagtacagcgccatcgagggtgttcaggaagatgtcatcgag
atcctcctgaacctcaaaggcctggctgtcaagctgcatggccgtgacgaagtaacgctg
agcctttcgaagaaaggcccgggcgtggtcactgctgccgatattcagctggatcatgat
gtcgaaatcgtcaacggcgaccacgttatcgccaacatggcggacaacggcgtcctgaac
atgaagctcaaggtgtcccgcggtcgtggctacgagcccgccgacgcgcgccagagcgac
gaagacgagagccgcagcattggtcgtctgcagctcgacgcctcgttcagccccgttcgt
cgtgttgcctacgtggtcgaaaacgcccgtgttgagcagcgcaccaacctggacaagctg
gtcatcgatctggaaaccaacggtaccctggaccctgaagaggccatccgtcgtgccgct
accatcctgcaacaccaactggctgcgttcgtcgacctgaagggcgacagcgagccggta
gtggtcgagcaggaagatgagatcgacccgatcctgctgcgtcctgttgatgacctcgag
ctgaccgtacgctcggccaactgcctgaaggcggagaacatctactacatcggtgatctg
atccagcgcaccgaagtagagctgttgaagactccgaacctgggcaagaagtccctgacc
gagatcaaggacgtcctggcctcccgtggtttgtctctcggcatgcgcctcgacaactgg
ccgccggcaagtctcaagaaggacgacaaggcgactgcctga
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