Metapseudomonas resinovorans: PCA10_10140
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Entry
PCA10_10140 CDS
T02708
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pre
Metapseudomonas resinovorans
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pre03019
]
PCA10_10140 (cafA)
03009 Ribosome biogenesis [BR:
pre03009
]
PCA10_10140 (cafA)
Messenger RNA biogenesis [BR:
pre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCA10_10140 (cafA)
Ribosome biogenesis [BR:
pre03009
]
Prokaryotic type
rRNA processing factors
PCA10_10140 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
BAN46746
UniProt:
S6ARU0
LinkDB
All DBs
Position
1088213..1089670
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTLRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHASEISNREGSAVESISALVHEGQALVVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTSHVGISLKIEDEAERERLKQVVADCIAAEGIEEAGGFILRTAADGARTDEILA
DIRYLRRLWEQISAQMQTAPSPSVIYEDLSLALRTLRDLVNPRIEKIRIDSRETFQKVTQ
FVDELMPEVSDRLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLIIDPTEAMTTID
VNTGAFVGHRTLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLIQVLCEPCSCCQGRGLLKTAETICYEI
FREILREARAYQAEGYLVLANQKVVDRLLDEESGNVADLEAFIGRPIKFQVETMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagattctgatcaatatcacgccgatggaatcgcgcgtggcggtggtggaa
aacggtgtgctgcaggaggtgcatgtcgaacgcacgctgcgtcgcggcatagtcggcaac
atctacaagggcaaggtggtgcgggtgctgccgggtatgcaggcggccttcgtcgacatc
ggcctggaccgcgcggccttcatccacgcctctgaaatcagcaaccgcgaaggcagcgcg
gtggaaagcatcagcgccctggtccacgagggccaggccctggtggtgcaggttaccaag
gaccccatcggcagcaagggcgcgcgcctcaccacccagctgtcgatcccctcgcgctac
ctggtgtacatgccgcgcaccagccatgtgggtatctccctgaagatcgaggacgaggcc
gagcgcgagcgcctcaagcaggtggtggccgactgcatcgccgccgaagggatcgaggaa
gccggggggttcatcctgcggaccgccgccgatggcgcccgcaccgacgagatcctcgcc
gatatccgctacctgcgccgactctgggaacagatttccgcacagatgcagaccgccccc
tcgccctcggtgatatacgaagacctcagcctggccctgcgcaccctgcgcgacctggtc
aacccgcgcatcgagaagatccgcatcgactcccgggaaaccttccagaaggtcacccag
ttcgtcgacgaactgatgccggaagtctccgaccgcctggagcactaccccggcgagcgg
ccgatcttcgacctctacggggtcgaggacgagatccagaaggccctggagcgcaaggtg
ctgctcaagtccggcggctacctgatcatcgacccgaccgaggcgatgaccaccatcgac
gtcaacaccggcgccttcgtcggccaccgcactctcgaagagaccatcttcaagaccaac
ctcgaggccgccaccgccattgcccgccagctgcgcctgcgcaacctgggcggcatcatc
atcatcgacttcatcgacatggaggatgaggagcaccagcgtcaggtactgcggaccctg
gaaaagcagctggagcgagaccacgccaagaccaacatcatcggcatcaccgagctcggc
ctggtgcagatgacccgcaagcgcacccgcgagagcctgatccaggtgctctgcgagccg
tgctcctgctgccaggggcgtggcttgttgaagaccgcggaaaccatttgctacgagatc
ttccgcgagatcctccgcgaggcccgcgcctaccaggccgaaggctacctggtgctggcc
aaccagaaggtggtggaccgcctgctggacgaagaatcgggcaacgtcgccgatctggag
gccttcatcggtcgtcctatcaagttccaggtggaaaccatgtattcccaggaacagtac
gacgtggttctgctttga
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