Metapseudomonas resinovorans: PCA10_10290
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Entry
PCA10_10290 CDS
T02708
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
pre
Metapseudomonas resinovorans
Pathway
pre02020
Two-component system
pre02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCA10_10290 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PCA10_10290 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pre03021
]
PCA10_10290 (rpoN)
Transcription machinery [BR:
pre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCA10_10290 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BAN46761
UniProt:
S6ARV2
LinkDB
All DBs
Position
complement(1103955..1105409)
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AA seq
484 aa
AA seq
DB search
MTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDTSDPMAEGDQQSNSGNQ
DSSFQESSVQTNAEALEDGEWHERIPSELPVDTAWEDVYQTSASSLPSNDDDEWDFTSRT
SVGESLQSHLLWQLNLAPMSDTDRLIGVTLIDCINNDGYLEETLAEIVEAFDPELGIELD
EVEVVLHRIQQFEPAGIGARDLRECLILQLRQLPSGTPWLVEAQRLAADFLDLLGSRDYS
QLMRRMKVKEDELRQIIELIQCLNPRPGSQIEASEPEYVVPDVIVRKHNERWLVELNQEA
VPRLRVNPHYAGFVRRADSSADNTFMRNQLQEARWFIKSLQSRNETLMKVATQIVEHQRG
FLEYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELKYFFSSHVSTSEGG
ECSSTAIRAIIKKLVAAENPKKPLSDSKIAGLLEAQGIQVARRTVAKYRESLGIAPSSER
KRLM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcagctgcaacaggccatccgcctgctccaactctccaccctggacctccaa
caggaaatccaggaagcgctggagtccaatcccatgctcgagcggcaggaggatggcgac
gatttcgacacctccgaccccatggccgaaggtgaccagcagtccaattccggcaaccag
gattccagcttccaggagtccagcgtccagaccaacgccgaagccctggaagacggcgaa
tggcacgagcgcatccccagcgaactccccgtcgacaccgcctgggaagacgtctaccag
accagcgccagcagcctgccgagcaacgatgacgacgagtgggacttcacctcgcgcacc
tcggtcggcgaaagcctgcagagccacctgctctggcagctcaacctggcgccgatgtcc
gacaccgatcgcctgattggggtcaccctgatcgactgcatcaacaacgacggctatctc
gaggaaaccctcgccgagatcgtcgaagccttcgaccccgagctcggtatcgagctggac
gaggtcgaggtcgtcctccaccgcatccagcagttcgagcccgccggcatcggcgcacgc
gacctgcgcgagtgcctgatcctgcaactgcgccagctgccctcgggcacgccctggctg
gtggaggcccagcgcctcgccgccgacttcctcgacctgctcggcagccgcgactacagc
cagctgatgcgccgcatgaaggtcaaggaagacgagctgcgccagatcatcgaactgatc
cagtgcctcaacccccgcccgggctcgcagatcgaagccagcgaacccgagtacgtggtg
ccggacgtcatcgtgcgcaagcacaacgagcgctggctggtggaactgaaccaggaagcc
gtgccgcgcctgcgggtcaatccgcactacgccggcttcgtccgtcgcgccgactccagc
gccgacaacaccttcatgcgcaaccagttgcaggaagcccgctggttcatcaagagcctg
cagagccgcaacgagaccctgatgaaggtcgccacccagatcgtcgagcaccagcgcggc
ttcctggaatacggcgaagaggcgatgaagcccctggtcctgcacgacatcgccgaagcc
gtgggcatgcacgagtcgacgatttcccgcgtgaccacccagaaatacatgcacacaccc
cgcgggatctacgagctgaagtacttcttctccagccacgtcagcacctcggaaggcggc
gaatgctcgtctaccgcgatccgcgccatcatcaaaaaactggtcgctgcggaaaatccg
aaaaagccgttgagcgacagcaagatcgctggtttactggaggcacagggcattcaagtg
gcccgtcgcacagtagccaagtatcgtgaatcccttgggatagcgccttccagcgaacga
aagcgactgatgtga
DBGET
integrated database retrieval system
