Metapseudomonas resinovorans: PCA10_12040
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Entry
PCA10_12040 CDS
T02708
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pre
Metapseudomonas resinovorans
Pathway
pre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCA10_12040 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pre03019
]
PCA10_12040 (rhlB)
Enzymes [BR:
pre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCA10_12040 (rhlB)
Messenger RNA biogenesis [BR:
pre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PCA10_12040 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
BAN46936
UniProt:
S6ASB4
LinkDB
All DBs
Position
1288895..1290367
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AA seq
490 aa
AA seq
DB search
MLKALKKIFSKGEEPQVGPAPTVSSPLPVEKQEQPAKPKKAPREAGEKAEGSGERAPRGE
KKPRSDKPKPDKPRRERPAKAAAVDNWKLEDFNVEPQEGKTRFHDFNLDPRLMHAIHDLG
FPYCTPIQAQVLGHTLKGKDAIGRAQTGTGKTAAFLISTITQLLQTPPPKERYMGEPRAL
IIAPTRELVVQIAKDAQDLTKYSGLSVMSFVGGMDFDKQLRQLESRFCDILVATPGRLLD
FNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPFKGERQTLLFSATFTEDVMN
LAKQWTVDPSIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLIAQNDWTRVMVFANRKD
EVRRIEERLTKDGISAAQMSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIEGISH
VINFTLPEDPDDYVHRIGRTGRAGATGTSISFAGEDDAFALPPIEELLGRKINCEMPPTE
LLKPVPRKHH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcagcaagggcgaagagccgcaggtcggccccgcc
cccacagtgtcatcccccctcccggtcgagaagcaagagcagccggccaagcccaagaaa
gctccccgcgaagccggcgaaaaggccgaaggctctggcgagcgtgccccccgtggcgaa
aagaaaccccgtagcgacaagcccaagcccgacaagccgcgccgtgagcgcccggccaag
gccgccgctgtggataactggaagctcgaagatttcaacgtggagccccaggagggcaag
acccgcttccacgacttcaacctcgatccgcggttgatgcatgccatccacgacctgggc
ttcccctactgcaccccgatccaggcccaggtccttggccataccctcaagggcaaggac
gccatcggccgtgcccagaccggtaccggcaagaccgcggccttcctgatttccaccatc
acccagctgctgcaaacccctccgccgaaagagcgctacatgggcgagccccgtgcgctg
atcatcgcgccgacacgcgagctggtggtgcagatcgccaaggacgcccaggacctgacc
aagtacagcggcctcagcgtgatgagcttcgtcggcggcatggacttcgacaagcagctc
cgccagctggaatcgcgcttctgcgacatcctggtggccaccccgggccgtctgctggac
ttcaaccagcgcggcgaggtgcacctggacatggtcgaggtgatggtgctcgacgaagcg
gaccgcatgctcgacatgggcttcatcccgcaggtgcgccagatcatccgccagaccccc
ttcaagggcgagcgccagaccctgctgttctccgccaccttcaccgaagacgtgatgaac
ctggccaagcagtggaccgtggacccgtccatcgtcgagatcgagccggagaacgtcgcc
agcgataccgtcgaacagcacgtctatgccgtggccggcagtgacaagtacaagctgctc
tacaacctgatcgcccagaacgactggacccgcgtgatggtcttcgccaaccgcaaggac
gaagtgcgccgcatcgaggaacgcctgaccaaggacggcatcagtgccgcccagatgtcc
ggcgacgtgccccagcacaagcgcatcaagaccctggaaggcttccgcgaaggcaagatc
cgcgtgctggtggccaccgatgttgccggtcgcggcatccacatcgaaggcatcagccac
gtgatcaacttcaccctgccggaagatccggacgactacgtgcaccgcatcggccgtacc
ggccgcgccggcgccacgggcacctccatcagcttcgccggtgaggacgacgcgttcgcc
ctgccgccgatcgaggagctgctgggtcgcaagatcaactgcgagatgcccccgaccgaa
ctgctcaagccggtgccgcgcaagcaccactga
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