Metapseudomonas resinovorans: PCA10_18440
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Entry
PCA10_18440 CDS
T02708
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pre
Metapseudomonas resinovorans
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pre03016
]
PCA10_18440 (rnd)
Enzymes [BR:
pre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PCA10_18440 (rnd)
Transfer RNA biogenesis [BR:
pre03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PCA10_18440 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
BAN47576
UniProt:
S6ATR4
LinkDB
All DBs
Position
1980013..1981140
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AA seq
375 aa
AA seq
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MAIDIFWIRDDAALAEHCAVWRRLPFVALDTEFMRVDTFYPKAGLIQVGDGERAYLIDPL
LIRDWSPFAELLEDPALLKVLHACSEDLEVFLRLTGALPQPLLDTQLAAGYLGIGYSMGY
SRLVQAVLGIDLPKDETRSDWLQRPLTEMQIRYAAEDAQHLAELYTALEPRLTEPKRAWV
LEDGAELVANLRREVIPEELYREAKLAWKLSRAQLAVLRELCAWREIEARQRDQPRNRIL
REHSLWPLARFQPDNLVALARIDDMHPRTVRQDGNTLLKLIREAAETPPEHWPEALPEPL
PHEASPLLKQLRAVGQAEAERLGIAPELMLRKKHLEALLKSGYPDGPYSLPEGLRGWRRE
LMGQALLDTLATPGQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattttctggattcgcgacgacgccgcgctggccgaacattgcgccgta
tggcggcgtctgcccttcgtggccctggataccgagttcatgcgggtcgacaccttctac
cccaaggccggcctgatccaggtcggtgacggcgagcgggcgtacctgatcgatcccctg
ctgatccgcgactggtcgcctttcgccgaactgctggaagacccggcgctgctcaaggtg
ctgcacgcctgcagcgaggacctggaagtcttcctgcgcctgaccggcgcgctgccgcaa
ccgctgctggatacgcaactggccgccggctacctgggcatcggctactccatgggctac
tcgcgcctggtgcaggcggtgctcggcatcgacctgcccaaggacgagacgcgctccgac
tggctgcaacgccccctcaccgagatgcagattcgctacgccgccgaagacgcgcagcac
ctggccgagctctacaccgccctggaaccgcgcctgaccgaacccaagcgcgcctgggtg
ctggaggatggcgccgaactggtggccaacctgcgtcgcgaagtcattcccgaagagctc
taccgcgaagccaagctggcctggaagctctcccgtgcccagctcgccgtgctgcgagag
ctgtgcgcctggcgcgaaatcgaagcccgacagcgcgatcagccgcgcaaccgcatcctg
cgggaacacagcctctggcccctggcgcgcttccagccggacaatctcgtggccctggcg
cggatcgacgacatgcacccgcgcaccgtgcgccaggacggcaataccctgcttaaattg
atccgcgaggccgccgagaccccgcccgagcattggcccgaggccctgcccgagccgctg
ccccacgaggcctcgccgctgctcaagcaactgcgtgccgtgggccaggccgaagccgag
cgcttaggcatcgcgccggaactgatgctgcgcaagaagcacctggaggccttgctcaag
agcggttacccggacggcccctacagcctgcccgagggcctgcgcggctggcgccgtgaa
ctgatgggccaggccctgctggacaccctggccacgcccggccaatga
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