Metapseudomonas resinovorans: PCA10_21100
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Entry
PCA10_21100 CDS
T02708
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pre
Metapseudomonas resinovorans
Pathway
pre00071
Fatty acid degradation
pre00280
Valine, leucine and isoleucine degradation
pre00310
Lysine degradation
pre00362
Benzoate degradation
pre00380
Tryptophan metabolism
pre00410
beta-Alanine metabolism
pre00640
Propanoate metabolism
pre00650
Butanoate metabolism
pre00907
Pinene, camphor and geraniol degradation
pre00930
Caprolactam degradation
pre01100
Metabolic pathways
pre01110
Biosynthesis of secondary metabolites
pre01120
Microbial metabolism in diverse environments
pre01200
Carbon metabolism
pre01212
Fatty acid metabolism
Module
pre_M00087
beta-Oxidation
pre_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PCA10_21100 (fadB)
00650 Butanoate metabolism
PCA10_21100 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PCA10_21100 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PCA10_21100 (fadB)
00310 Lysine degradation
PCA10_21100 (fadB)
00380 Tryptophan metabolism
PCA10_21100 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PCA10_21100 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PCA10_21100 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PCA10_21100 (fadB)
00930 Caprolactam degradation
PCA10_21100 (fadB)
Enzymes [BR:
pre01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PCA10_21100 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PCA10_21100 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PCA10_21100 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PCA10_21100 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
Motif
Other DBs
NCBI-ProteinID:
BAN47842
UniProt:
S6AE69
LinkDB
All DBs
Position
2305995..2308142
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALEGGIVELKFDLKGESVNKFNRLTLNELRDAVAAIKADASVKGVIVSS
GKDVFIVGADITEFVENFQLPDEELVAGNLEANKIFSAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSSAAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIASGKENRAEDAL
KVGAVDAVVAPQLLQAGALDLVKRAIAGELDFKAKRQAKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGREKALEVEAAGFVKLAKTPVAASLIGLFLNDQEL
KKKAKQHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLTEASKL
LGKRVEKGRMTPAKMAEALTAIRPTMSYGDFGAVDIVVEAVVENPKVKQIVLAEVEGVVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLLEFGVDFVRIDKIMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVTDPVAYEVLKSIVKEQRELTDEDIINFMMIPLCLETVRCLEDGIVSTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTAKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagggcggtatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctgaacgaactg
cgcgatgcggttgcagccatcaaggccgatgcttcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtattcatcgtcggcgccgacatcaccgaattcgtcgaaaacttccagctg
cccgacgaggagctggttgccggcaacctcgaggccaacaagatcttcagcgccttcgaa
gacctggaagtccccaccgtcgccgcgatcaacggcattgccctgggcggcggcctggag
atgtgcctggcggctgactaccgcgtgatgagcagcgccgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcctgatcggt
gtcgacaacgccatcgagtggatcgcctccggcaaggaaaaccgtgccgaagacgcgctg
aaagtcggcgctgtcgatgcggtggtcgctccccagctgctgcaagccggtgccctggac
ctggtcaagcgcgccatcgccggcgagctggacttcaaggccaagcgccaggccaagctg
gaaaagctcaagctcaacgccattgagcagatgatggccttcgagaccgccaagggcttc
gtcgccggccaggccggtccgaactacccggccccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgcgagaaggccctggaagtcgaggccgccggcttcgtcaag
ctggccaagaccccggttgcggcaagcctgatcggcctgttcctgaatgaccaggaactg
aagaagaaagccaagcagcacgatgagatcgctcgcgacgtgaaactggctgccgtgctg
ggcgctggcatcatgggcggcggcatcgcctaccagtcggcttccaagggcaccccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctgaccgaggcttccaagctg
ctcggcaagcgcgtcgagaaaggccgcatgaccccggcgaaaatggccgaggccctgacc
gccattcgcccgaccatgtcctatggcgacttcggcgctgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggctgaagtggaaggcgtggtacgc
gaggacgcgatcctggcttccaacacctccaccatctccatcagcctgctggccaaggcg
ctgaagcgtcctgagaacttcgtcggcatgcacttcttcaaccccgtgcacatgatgccc
ctggtcgaagtcatccgtggcgagaagtccagcgacgtggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgcgtgctgttcccctatttcggtggcttcgccaagctgctggagttcggcgtcgac
ttcgtccgcatcgacaagatcatggagaagttcggctggcccatgggcccggcctatctg
tccgacgtggtcggcatcgacaccggccaccacggccgtgacgtgatggctgaaggcttc
ccggaccgcatggccgtggaaggcaagaccgccgtcgacgtgatgtacgaagccaatcgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagcgtggcaaaccg
aagaaggtcaccgatccggttgcctacgaagtgctcaagtcgatcgtcaaggaacagcgc
gagctgaccgacgaggacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtatcgaccgctgccgaggccgacatgggcctgatctac
ggcatcggcttcccgcccttccgtggtggtgcgctgcgttacatcgacagcatcggtgtg
gctgagttcgtggccctggccgacaagtacgccgacctgggcgcgctgtaccacccgacc
gccaagcttcgcgaaatggccaagaacggccagaagtttttcggctaa
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