Metapseudomonas resinovorans: PCA10_33450
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Entry
PCA10_33450 CDS
T02708
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pre
Metapseudomonas resinovorans
Pathway
pre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCA10_33450 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pre03019
]
PCA10_33450 (deaD)
03009 Ribosome biogenesis [BR:
pre03009
]
PCA10_33450 (deaD)
Enzymes [BR:
pre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCA10_33450 (deaD)
Messenger RNA biogenesis [BR:
pre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PCA10_33450 (deaD)
Ribosome biogenesis [BR:
pre03009
]
Prokaryotic type
rRNA helicases
PCA10_33450 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BAN49077
UniProt:
S6AG16
LinkDB
All DBs
Position
complement(3691041..3692729)
Genome browser
AA seq
562 aa
AA seq
DB search
MTQEIGEFAALGLHPNVLAAISAVGYEEPSPIQAQSIPVILAGHDMIGQAQTGTGKTAAF
ALPILSRIDPAKREPQALILAPTRELALQVATAFETYAKQMPGLSVVAVYGGAPMGPQLK
ALRQGAQVIVATPGRLCDHLRRDDKLLATVQQLVLDEADEMLKLGFMDDLEVIFEALPES
RQSVLFSATLPPSIRSIAERHLRNPQHVKIAAKTQTVARIEQAHLMVHADQKTGAVLRLL
EVEEFDALIAFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV
ATDVAARGIDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPNAQQVLDARIKKLTSAIAPLVVEAEANYGSLLDRLIADIGCSPRAL
AAALLQKATNGQALNLADVEREQPLVPGFQAREPRERRERDGGERGGERGEYRERRAPMP
LAEGRVRCRTALGTRDGIAAKNLLGAILNEGGIAREAIGRIQIRETFSLIELPEEGLDRL
LGKLKDTRVAGKQLKLRRYRED
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcgaattcgccgcgctcggacttcatcccaatgttctggccgcc
atctcggcggtcggctatgaagagccgtcccccatccaggcccaatcgattccggtgatc
ctcgccggtcacgacatgattggccaggcccagaccggtaccggcaagaccgcagccttc
gcgctgccgatcctgtcccgcatcgatccggccaaacgtgagccgcaggcgctgatcctg
gcaccgacccgcgagctcgcactgcaagttgccaccgccttcgaaacctacgccaagcag
atgcctggcctgagtgtggtcgccgtttacggtggcgcacccatggggccgcagctcaag
gccctgcgccagggcgcccaggtgatcgtggccactccgggccgtctctgcgaccacctg
cgtcgtgatgacaagctgctcgccaccgtgcagcagctggtgctggacgaagcggacgag
atgctcaagctcggcttcatggacgacctcgaagtgatcttcgaagccctgccggaaagc
cgccagagcgtgctgttctccgccacgctgccgccgtcgatccgttcgatcgccgagcgt
cacctgcgcaacccgcagcacgtcaagatcgccgccaagacccagaccgtggcgcgcatc
gagcaggcccacctgatggtccatgccgaccagaagaccggtgctgtgctgcgtctgctg
gaagtcgaggaattcgacgcgctgatcgccttcgtgcgtaccaagcaggcgaccctcgac
ctggccagcgccctggaagccaaaggctacaaggccgccgcgctgaacggcgatatcgcc
cagaaccagcgtgagcgcgtgatcgagtccctcaaggatggtcgtctggacatcgtggtc
gccaccgacgtggctgcccgtggtatcgatgtgccgcgcatcacccacgtgttcaacgtg
gatatgccctacgacccggaatcctacgtacaccgtatcggccgtaccggccgtgccggt
cgcgatggccgtgcgctgctgctggtgacgccgcgtgagcgccgcatgctgcaggtgatc
gagcgtgtgaccggtcagaaggttgccgaagtgcgcctgcccaacgcccagcaagtgctg
gacgcgcgcatcaagaagctgaccagcgccatcgctccgctggtggtcgaggccgaagcc
aactacggctcgctgctggatcgcctgattgccgatatcggttgcagcccgcgcgccctg
gccgcggccctgctgcagaaggctaccaatggtcaggccctgaacctggccgatgtcgag
cgcgagcagccgctggtgccgggcttccaggcccgcgagccgcgcgagcgtcgtgagcgt
gatggtggcgagcgtggtggtgagcgtggtgagtaccgcgagcgccgtgcaccgatgccg
ctggccgaaggccgcgtgcgttgccgcaccgctttgggtactcgcgacggcatcgccgcg
aagaacctgctgggcgcgatcctcaacgagggtggcattgctcgcgaagccatcggtcgc
atccagatccgcgaaaccttcagcctgatcgagctgccggaagaaggcctcgaccgcctg
ctgggcaagctgaaggacactcgcgtggctggtaagcagctgaagctgcgtcgctaccgc
gaagactga
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