Metapseudomonas resinovorans: PCA10_54540
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Entry
PCA10_54540 CDS
T02708
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pre
Metapseudomonas resinovorans
Pathway
pre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCA10_54540 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pre03021
]
PCA10_54540 (rho)
03019 Messenger RNA biogenesis [BR:
pre03019
]
PCA10_54540 (rho)
Transcription machinery [BR:
pre03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PCA10_54540 (rho)
Messenger RNA biogenesis [BR:
pre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PCA10_54540 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAN51186
UniProt:
S6B1V0
LinkDB
All DBs
Position
complement(6074194..6075453)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPIGELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDSIN
YDRPENAKNKILFENLTPLFPNERLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NKSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLLDKLKDTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgaactcaagcaaaagccgattggcgaacttctggaaatgtctgatgcc
atgggcctggagaacatggcccgttcgcgcaagcaggacatcatcttcgctttgctgaag
aagcacgcgaagagcggcgaggagatctccggtgacggcgtgctggagattctccaggac
ggcttcggcttcctgcgctccgccgactcctcctacctggccggcccggacgacatctac
gtctcgcccagccagatccgccgcttcaacctgcggaccggcgacaccatagtcggcaag
attcgtccgcccaaggaaggcgagcgttacttcgcgctgctcaaggtcgattcgatcaac
tacgaccgacccgagaacgccaagaacaagatcctgttcgagaacctcacgcccctgttc
cccaatgagcgcctgaagatggaagccggcaacggctccaccgaagacctcaccggccgc
gtgatcgatctctgcgcgcccatcggcaagggccagcgcggcctgatcgtcgccccgccg
aaagcgggcaagaccatcatgctgcagaacatcgcggccaacatcacccgcaacaacccc
gagtgccacctgatcgtcctgctgatcgacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtcgcttccaccttcgacgaaccgccgacccgccacgtg
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctggactccatcacccgtctggcccgtgcctacaacaccgtgatcccgagc
tccggcaaggtgctcaccggtggtgtcgacgcccacgccctggagaagcccaagcgcttc
ttcggtgccgcgcgcaacatcgaggaaggcggttcgctgaccatcctcgccaccgcgctg
gtggaaaccggctcgaagatggatgaagtcatctacgaagagttcaagggcaccggcaac
atggagctgccgctggatcgccgcatcgccgagaagcgcgtgttcccggccatcaacatc
aacaagtccggtacccgccgcgaagagctgctgactgccgacgacgagctgcagcgcatg
tggatcctgcgcaagctgctgcacccgatggacgagatcgccgccatcgagttcctgctc
gacaagctgaaagacaccaagaccaacgacgaattcttcctgtcgatgaagcgcaagtaa
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