Metapseudomonas resinovorans: PCA10_56000
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Entry
PCA10_56000 CDS
T02708
Name
(GenBank) putative RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pre
Metapseudomonas resinovorans
Brite
KEGG Orthology (KO) [BR:
pre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pre03000
]
PCA10_56000
Transcription factors [BR:
pre03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCA10_56000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BAN51332
UniProt:
S6AKC6
LinkDB
All DBs
Position
complement(6226608..6227474)
Genome browser
AA seq
288 aa
AA seq
DB search
MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAQNVGVSEPTIVRFCRAIGC
GGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADFSLKIFDTTLHTLMEVREKLDPEALQR
AIGACAQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPSDVAI
CISQSGRSKDLLITANLVREAGATLITLCPSQTPLADLATVNLAIDVQEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSLKSAED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgctgcaacacatcgcccagtcgcgccatctgctgcgcaagtcggaactgaaa
gtcgccgatcacgtcctgctcgatcccgctgcggtcatgcacagctccatggcggacctt
gcccagaatgtcggggtcagtgaacccaccatcgtgcgcttctgccgcgccattggttgc
ggcggcttccaggacctcaagctgaaactggcgcagagcctggccgccggcgccagcttc
ggccagttcgcgatacacgaggacgactcggtcgcggacttcagcctgaagatcttcgac
accacgctgcataccctgatggaagtgcgcgagaagctcgaccccgaggccctgcagcgt
gccatcggcgcctgcgcccaggcccagcgcgtggagttctacggcttcggcgcgtccggc
gcggtggcggccgacgcccagcacaagttcttccgcctgctgctgaccgcggcggcctat
tccgacccgcacatgcaggcgatgtcggcggtcaccctgaaaccctcggacgtggccatc
tgcatctcccagtcgggccgctcgaaggacctgctgatcaccgccaacctggtgcgcgag
gccggcgccacgctgatcaccctctgcccgagccagacgcccctggcggacctcgccacg
gtgaacctggccatcgacgtgcaggaagacaccgagatctacaccccgctgacctcgcgc
atcgcccacctggtggtgatcgacgtgctggccatgggcgtggccatggcccgtggcccg
agcctggtcaaccacctcaagagcgtgaagcgcagcttgcgcagcctgcgtctgtcgccc
aagtcgctgaagagcgccgaggactag
DBGET
integrated database retrieval system
